HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Neuronal projections: Not detected
Synapses: Low
RNA expressioni
Consensus:77.7 nTPM
HPA Brain:123.4 nTPM
GTEx:77.7 nTPM
FANTOM5:138.1 Scaled Tags Per Million
Pig:58.4 nTPM
Mouse:113.0 nTPM
Allen mouse:7.7 Expression energy

HIPPOCAMPUS - Extended tissue profilei , antibody HPA017320
Glial cells Not detected
Neuronal cells Low
Neuronal projections Not detected
Synapses Low

HIPPOCAMPUS - Antibody stainingi
Antibody HPA017320
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 123.4
Sample id Sample description nTPM
Hippocampus
nTPM: 106.0
1898 Male, age 80, left hemisphere 116.2
2529 Female, age 94, left hemisphere 114.7
1911 Female, age 85, right hemisphere 114.0
2621 Female, age 67, right hemisphere 113.4
1855 Male, age 76, left hemisphere 96.1
2148 Female, age 91, left hemisphere 81.5
Dentate gyrus
nTPM: 109.7
2530 Female, age 94, left hemisphere 140.8
2528 Male, age 74, both hemispheres 139.5
2010 Male, age 76, both hemispheres 125.0
2246 Female, age 85, both hemispheres 96.2
1927 Female, age 91, both hemispheres 82.4
2531 Female, age 67, both hemispheres 74.5
Entorhinal gyrus
nTPM: 96.1
2117 Female, age 91, right hemisphere 145.8
2764 Male, age 80, right hemisphere 100.0
1787 Male, age 76, left hemisphere 98.2
1938 Female, age 85, left hemisphere 92.4
2613 Female, age 94, left hemisphere 81.2
2686 Male, age 75, right hemisphere 59.1
Hippocampus, CA1
nTPM: 111.2
2527 Male, age 74, both hemispheres 129.8
2082 Female, age 91, right hemisphere 114.8
2749 Male, age 80, left hemisphere 111.7
1873 Female, age 85, both hemispheres 110.2
2045 Male, age 76, both hemispheres 89.4
Hippocampus, CA2
nTPM: 123.4
2249 Male, age 74, both hemispheres 222.2
2437 Female, age 94, left hemisphere 117.7
1963 Male, age 80, left hemisphere 112.5
1940 Female, age 85, left hemisphere 110.2
2113 Female, age 91, right hemisphere 94.2
1892 Male, age 76, both hemispheres 83.8
Hippocampus, CA3
nTPM: 100.3
2436 Male, age 74, both hemispheres 181.2
1891 Female, age 85, both hemispheres 113.4
1867 Male, age 76, both hemispheres 98.9
2137 Male, age 80, left hemisphere 79.6
2620 Female, age 94, left hemisphere 75.0
2861 Female, age 67, both hemispheres 53.7
Parahippocampal cortex
nTPM: 92.3
2250 Female, age 67, right hemisphere 131.8
1990 Female, age 91, right hemisphere 110.1
2018 Male, age 76, both hemispheres 104.3
1933 Female, age 85, both hemispheres 96.0
2245 Female, age 91, both hemispheres 92.1
2532 Female, age 72, left hemisphere 87.3
2692 Male, age 74, both hemispheres 84.6
1850 Male, age 80, both hemispheres 83.1
2693 Female, age 94, both hemispheres 79.2
2622 Female, age 67, right hemisphere 54.7
Perirhinal gyrus
nTPM: 87.2
1847 Female, age 91, left hemisphere 97.9
1794 Male, age 80, right hemisphere 94.7
2521 Female, age 94, right hemisphere 92.5
1841 Female, age 85, right hemisphere 81.1
2848 Male, age 76, right hemisphere 69.8
Subiculum
nTPM: 115.6
1977 Female, age 85, both hemispheres 136.7
2042 Male, age 76, both hemispheres 119.6
2619 Male, age 74, both hemispheres 118.4
1901 Male, age 80, both hemispheres 117.8
2729 Female, age 91, right hemisphere 106.3
2438 Female, age 94, left hemisphere 94.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 77.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 77.7
Samples: 197

Max nTPM: 140.6
Min nTPM: 32.3
Std nTPM: 17.1
Median nTPM: 76.8
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 140.6
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 120.4
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 111.4
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 111.3
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 111.0
GTEX-11GSO-0011-R1b-SM-57WD3 60-69 years, male 109.8
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 109.7
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 109.2
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 106.9
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 105.1
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 104.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 138.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 138.1
FF:10153-102I9 76 years, female 163.1
FF:10169-103B7 60 years, female 113.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 58.4
Pig sample Sample description nTPM
Subiculum
nTPM: 58.5
Samples: 4

Max nTPM: 79.0
Min nTPM: 45.0
Sample A Female 79.0
Sample B Female 52.9
Sample C Male 57.0
Sample D Male 45.0
Dorsal hippocampus
nTPM: 52.6
Samples: 4

Max nTPM: 63.7
Min nTPM: 38.6
Sample A Female 63.7
Sample B Female 54.0
Sample C Male 53.9
Sample D Male 38.6
Entorhinal cortex
nTPM: 41.0
Samples: 4

Max nTPM: 45.0
Min nTPM: 31.1
Sample A Female 44.6
Sample B Female 43.1
Sample C Male 45.0
Sample D Male 31.1
Ventral hippocampus
nTPM: 49.8
Samples: 4

Max nTPM: 64.2
Min nTPM: 33.6
Sample A Female 41.0
Sample B Female 33.6
Sample C Male 60.4
Sample D Male 64.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 113.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 113.0
Samples: 4

Max nTPM: 158.7
Min nTPM: 88.4
Sample A Male 96.9
Sample B Male 88.4
Sample C Female 108.1
Sample D Female 158.7
Hippocampal formation
nTPM: 88.6
Samples: 4

Max nTPM: 90.5
Min nTPM: 86.3
Sample A Male 89.8
Sample B Male 87.8
Sample C Female 86.3
Sample D Female 90.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.7
1700 Antisense, RP_040526_02_D07, Mouse strain C57BL/6J (56 days, male) 7.7
1699 Antisense, RP_040526_02_D07, Mouse strain C57BL/6J (56 days, male) 7.6

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