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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
222.5
nTPM
FANTOM5:
267.0
Scaled Tags Per Million
Pig:
110.6
nTPM
Allen mouse:
6.3
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
222.5
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 169.6
1984
Male, age 76, both hemispheres
187.5
2188
Female, age 91, both hemispheres
172.9
2301
Female, age 85, both hemispheres
170.0
2090
Male, age 80, both hemispheres
148.0
Dorsal cochlear nucleus nTPM: 174.0
2187
Female, age 91, both hemispheres
188.6
2370
Male, age 61, both hemispheres
185.5
2058
Male, age 76, both hemispheres
183.2
2378
Male, age 80, both hemispheres
168.7
2802
Male, age 74, right hemisphere
144.0
Dorsal tegmental nucleus nTPM: 192.2
2083
Male, age 80, both hemispheres
236.6
2358
Male, age 61, both hemispheres
181.1
1936
Male, age 76, left hemisphere
176.8
2326
Male, age 74, both hemispheres
174.3
Dorsolateral tegmental area nTPM: 222.5
2751
Female, age 85, both hemispheres
253.9
2654
Male, age 80, both hemispheres
226.4
2360
Male, age 74, both hemispheres
214.8
2337
Male, age 61, both hemispheres
214.0
2141
Male, age 76, both hemispheres
203.6
Kolliker-Fuse nucleus nTPM: 204.5
2315
Male, age 76, right hemisphere
255.3
2163
Male, age 80, both hemispheres
182.0
2793
Female, age 91, left hemisphere
176.1
Lateral lemniscal nuclei nTPM: 190.7
2746
Female, age 85, left hemisphere
215.0
2036
Male, age 80, both hemispheres
211.7
2320
Female, age 91, left hemisphere
185.4
2453
Male, age 74, right hemisphere
174.0
2169
Male, age 76, both hemispheres
167.2
Lateral parabrachial nucleus nTPM: 191.2
2139
Female, age 85, right hemisphere
231.1
2013
Male, age 80, both hemispheres
201.2
2792
Male, age 76, both hemispheres
183.8
2790
Male, age 61, both hemispheres
148.8
Lateral vestibular nucleus nTPM: 176.4
2184
Male, age 76, both hemispheres
182.4
2311
Male, age 80, both hemispheres
170.5
Locus coeruleus nTPM: 168.8
2123
Female, age 91, both hemispheres
223.4
1980
Male, age 76, both hemispheres
195.0
2317
Female, age 72, unknown
182.3
2162
Male, age 80, both hemispheres
172.6
2014
Male, age 55, unknown
151.2
2788
Male, age 74, unknown
135.5
2720
Male, age 74, both hemispheres
121.8
Medial parabrachial nucleus nTPM: 203.8
2170
Female, age 91, both hemispheres
242.0
2463
Female, age 85, right hemisphere
220.1
2854
Male, age 80, both hemispheres
194.8
2786
Male, age 76, both hemispheres
194.0
2156
Male, age 61, both hemispheres
168.1
Medial periolivary nuclei nTPM: 180.1
2791
Male, age 74, right hemisphere
236.1
2171
Female, age 85, both hemispheres
195.1
2063
Male, age 76, both hemispheres
172.2
2081
Male, age 80, both hemispheres
155.5
2458
Female, age 91, both hemispheres
141.8
Motor facial nucleus nTPM: 172.9
2365
Male, age 74, right hemisphere
215.4
2126
Male, age 61, both hemispheres
201.4
2062
Male, age 76, both hemispheres
195.5
2795
Female, age 91, both hemispheres
149.0
2697
Female, age 85, both hemispheres
141.0
2327
Male, age 80, both hemispheres
135.2
Motor trigeminal nucleus nTPM: 166.2
2335
Male, age 61, both hemispheres
187.2
2309
Male, age 76, both hemispheres
168.5
2560
Male, age 74, both hemispheres
166.1
2079
Male, age 80, both hemispheres
163.5
2321
Female, age 91, both hemispheres
145.5
Nuclei of the trapezoid body nTPM: 181.1
2159
Male, age 61, both hemispheres
224.0
2735
Female, age 85, both hemispheres
189.8
1983
Male, age 76, both hemispheres
184.4
2368
Female, age 91, both hemispheres
156.7
2166
Male, age 80, both hemispheres
150.9
Nucleus raphe magnus nTPM: 190.7
2455
Male, age 74, both hemispheres
230.8
2160
Male, age 61, both hemispheres
216.7
2051
Male, age 76, both hemispheres
181.6
2459
Female, age 91, both hemispheres
177.6
2172
Female, age 85, both hemispheres
171.6
2328
Male, age 80, both hemispheres
166.0
Paramedian reticular nucleus nTPM: 204.1
2050
Female, age 85, both hemispheres
225.6
2313
Male, age 61, both hemispheres
215.0
2057
Male, age 80, both hemispheres
205.2
2052
Male, age 76, both hemispheres
170.9
Pedunculopontine tegmental nucleus nTPM: 207.0
1921
Female, age 85, both hemispheres
221.8
2338
Male, age 61, both hemispheres
201.9
2334
Male, age 80, both hemispheres
197.3
Pontine nuclei nTPM: 199.3
2787
Female, age 85, both hemispheres
242.9
2727
Male, age 61, right hemisphere
223.9
2109
Female, age 72, unknown
213.8
2454
Male, age 74, left hemisphere
209.1
1863
Male, age 55, unknown
200.7
2319
Female, age 91, both hemispheres
178.2
1968
Male, age 76, left hemisphere
169.6
2115
Male, age 80, left hemisphere
156.4
Pontine raphe nucleus nTPM: 189.3
2122
Female, age 85, midline
190.4
2853
Male, age 76, midline
188.1
Posteroventral cochlear nucleus nTPM: 195.2
2070
Male, age 76, both hemispheres
223.2
2752
Female, age 85, both hemispheres
200.6
2341
Male, age 80, both hemispheres
199.6
2371
Male, age 61, both hemispheres
180.8
2135
Female, age 91, both hemispheres
171.6
Principal sensory trigeminal nucleus nTPM: 175.2
2158
Male, age 61, both hemispheres
196.8
2367
Female, age 91, left hemisphere
169.4
2324
Male, age 76, both hemispheres
169.0
2008
Male, age 80, left hemisphere
165.5
Reticular pontine nucleus, caudal nTPM: 170.3
2457
Female, age 91, both hemispheres
186.6
2092
Male, age 76, both hemispheres
185.6
2332
Male, age 80, right hemisphere
161.3
2559
Male, age 74, both hemispheres
147.7
Reticular pontine nucleus, oral nTPM: 218.7
1939
Male, age 80, both hemispheres
278.6
2012
Female, age 85, both hemispheres
239.4
2361
Male, age 74, both hemispheres
196.7
2167
Male, age 76, both hemispheres
196.5
2366
Female, age 91, both hemispheres
182.4
Reticulotegmental nucleus nTPM: 174.6
2333
Male, age 80, both hemispheres
191.5
2325
Male, age 76, both hemispheres
176.5
2322
Female, age 91, both hemispheres
176.1
2452
Male, age 74, both hemispheres
154.2
Spinal trigeminal nucleus, oral nTPM: 177.0
2737
Female, age 85, both hemispheres
207.2
2164
Male, age 80, both hemispheres
168.7
1978
Male, age 76, both hemispheres
155.0
Subcoeruleus area nTPM: 181.4
2369
Female, age 85, left hemisphere
256.9
1958
Male, age 80, both hemispheres
191.6
2323
Female, age 91, left hemisphere
175.8
2089
Male, age 76, left hemisphere
142.9
2451
Male, age 74, both hemispheres
140.0
Superior olive nTPM: 183.4
2364
Male, age 74, right hemisphere
248.6
1875
Female, age 85, both hemispheres
200.3
2020
Male, age 76, both hemispheres
167.0
2329
Male, age 80, right hemisphere
157.8
2561
Female, age 91, both hemispheres
143.2
Ventral periolivary nuclei nTPM: 155.2
2165
Male, age 80, both hemispheres
181.2
2130
Female, age 85, both hemispheres
164.1
2023
Male, age 76, both hemispheres
163.2
2794
Female, age 91, left hemisphere
112.4
Ventrolateral tegmental area, A5 NE cell group nTPM: 186.6
2840
Female, age 85, both hemispheres
220.2
2449
Male, age 74, both hemispheres
203.3
2359
Male, age 61, both hemispheres
191.8
1959
Male, age 76, both hemispheres
168.7
2456
Female, age 91, both hemispheres
168.2
2161
Male, age 80, both hemispheres
167.2
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
110.6
Pig sample
Sample description
nTPM
Pons nTPM: 110.6
Samples: 4
Max nTPM: 182.9
Min nTPM: 80.0
Sample A
Female
182.9
Sample B
Female
89.8
Sample C
Male
80.0
Sample D
Male
89.6
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
