HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:42.3 nTPM
HPA Brain:17.1 nTPM
GTEx:42.3 nTPM
FANTOM5:62.6 Scaled Tags Per Million
Pig:32.9 nTPM
Mouse:33.2 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 17.1
Sample id Sample description nTPM
Hippocampus
nTPM: 14.1
1898 Male, age 80, left hemisphere 17.2
2529 Female, age 94, left hemisphere 15.6
1911 Female, age 85, right hemisphere 15.0
1855 Male, age 76, left hemisphere 14.7
2148 Female, age 91, left hemisphere 11.7
2621 Female, age 67, right hemisphere 10.1
Dentate gyrus
nTPM: 13.3
1927 Female, age 91, both hemispheres 17.8
2528 Male, age 74, both hemispheres 17.0
2010 Male, age 76, both hemispheres 16.1
2246 Female, age 85, both hemispheres 13.8
2531 Female, age 67, both hemispheres 7.8
2530 Female, age 94, left hemisphere 7.6
Entorhinal gyrus
nTPM: 11.1
2117 Female, age 91, right hemisphere 14.1
1938 Female, age 85, left hemisphere 13.3
2764 Male, age 80, right hemisphere 11.7
1787 Male, age 76, left hemisphere 10.4
2686 Male, age 75, right hemisphere 10.0
2613 Female, age 94, left hemisphere 7.2
Hippocampus, CA1
nTPM: 16.1
2749 Male, age 80, left hemisphere 19.6
2082 Female, age 91, right hemisphere 17.9
2045 Male, age 76, both hemispheres 15.3
1873 Female, age 85, both hemispheres 14.3
2527 Male, age 74, both hemispheres 13.1
Hippocampus, CA2
nTPM: 15.6
2249 Male, age 74, both hemispheres 23.8
1940 Female, age 85, left hemisphere 15.3
1892 Male, age 76, both hemispheres 15.2
1963 Male, age 80, left hemisphere 14.6
2113 Female, age 91, right hemisphere 14.3
2437 Female, age 94, left hemisphere 10.6
Hippocampus, CA3
nTPM: 17.1
2436 Male, age 74, both hemispheres 33.2
2137 Male, age 80, left hemisphere 20.3
1867 Male, age 76, both hemispheres 17.3
1891 Female, age 85, both hemispheres 14.5
2620 Female, age 94, left hemisphere 9.9
2861 Female, age 67, both hemispheres 7.1
Parahippocampal cortex
nTPM: 12.4
1850 Male, age 80, both hemispheres 15.2
2250 Female, age 67, right hemisphere 14.0
1933 Female, age 85, both hemispheres 13.6
1990 Female, age 91, right hemisphere 13.3
2018 Male, age 76, both hemispheres 13.3
2245 Female, age 91, both hemispheres 12.5
2693 Female, age 94, both hemispheres 12.4
2692 Male, age 74, both hemispheres 10.7
2532 Female, age 72, left hemisphere 10.2
2622 Female, age 67, right hemisphere 8.8
Perirhinal gyrus
nTPM: 15.4
1847 Female, age 91, left hemisphere 18.1
1841 Female, age 85, right hemisphere 16.8
2521 Female, age 94, right hemisphere 15.6
1794 Male, age 80, right hemisphere 15.3
2848 Male, age 76, right hemisphere 11.3
Subiculum
nTPM: 13.0
2729 Female, age 91, right hemisphere 16.9
1901 Male, age 80, both hemispheres 14.9
2042 Male, age 76, both hemispheres 12.1
2619 Male, age 74, both hemispheres 12.0
2438 Female, age 94, left hemisphere 11.7
1977 Female, age 85, both hemispheres 10.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 42.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 42.3
Samples: 197

Max nTPM: 125.4
Min nTPM: 13.1
Std nTPM: 15.6
Median nTPM: 39.7
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 125.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 105.1
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 87.2
GTEX-1B933-0011-R1b-SM-9QEGW 50-59 years, female 81.6
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 81.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 78.6
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 76.7
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 74.4
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 73.8
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 72.1
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 71.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 62.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 62.6
FF:10169-103B7 60 years, female 78.9
FF:10153-102I9 76 years, female 46.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 32.9
Pig sample Sample description nTPM
Subiculum
nTPM: 29.4
Samples: 4

Max nTPM: 42.6
Min nTPM: 24.0
Sample A Female 42.6
Sample B Female 26.1
Sample C Male 24.0
Sample D Male 24.7
Dorsal hippocampus
nTPM: 32.9
Samples: 4

Max nTPM: 45.0
Min nTPM: 20.5
Sample A Female 45.0
Sample B Female 29.3
Sample C Male 36.7
Sample D Male 20.5
Entorhinal cortex
nTPM: 29.3
Samples: 4

Max nTPM: 38.6
Min nTPM: 21.6
Sample A Female 27.0
Sample B Female 38.6
Sample C Male 29.9
Sample D Male 21.6
Ventral hippocampus
nTPM: 28.9
Samples: 4

Max nTPM: 32.7
Min nTPM: 25.3
Sample A Female 32.7
Sample B Female 25.4
Sample C Male 25.3
Sample D Male 32.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 33.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 32.8
Samples: 4

Max nTPM: 36.3
Min nTPM: 30.3
Sample A Male 34.4
Sample B Male 30.3
Sample C Female 36.3
Sample D Female 30.3
Hippocampal formation
nTPM: 33.2
Samples: 4

Max nTPM: 37.7
Min nTPM: 28.2
Sample A Male 37.7
Sample B Male 28.2
Sample C Female 30.6
Sample D Female 36.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
71210514 Antisense, RP_050810_04_C12, Mouse strain C57BL/6J (56 days, male) 0.0

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