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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
311.9
nTPM
FANTOM5:
164.7
Scaled Tags Per Million
Pig:
90.9
nTPM
Allen mouse:
18.7
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
311.9
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 125.3
2301
Female, age 85, both hemispheres
146.3
1984
Male, age 76, both hemispheres
134.8
2188
Female, age 91, both hemispheres
112.1
2090
Male, age 80, both hemispheres
107.9
Dorsal cochlear nucleus nTPM: 141.0
2058
Male, age 76, both hemispheres
186.9
2370
Male, age 61, both hemispheres
164.6
2187
Female, age 91, both hemispheres
143.3
2802
Male, age 74, right hemisphere
118.6
2378
Male, age 80, both hemispheres
91.6
Dorsal tegmental nucleus nTPM: 152.6
2083
Male, age 80, both hemispheres
190.7
1936
Male, age 76, left hemisphere
161.8
2358
Male, age 61, both hemispheres
149.0
2326
Male, age 74, both hemispheres
108.9
Dorsolateral tegmental area nTPM: 136.1
2654
Male, age 80, both hemispheres
186.6
2141
Male, age 76, both hemispheres
175.8
2751
Female, age 85, both hemispheres
143.6
2360
Male, age 74, both hemispheres
110.0
2337
Male, age 61, both hemispheres
64.6
Kolliker-Fuse nucleus nTPM: 166.5
2163
Male, age 80, both hemispheres
220.3
2793
Female, age 91, left hemisphere
162.8
2315
Male, age 76, right hemisphere
116.4
Lateral lemniscal nuclei nTPM: 274.5
2453
Male, age 74, right hemisphere
340.3
2169
Male, age 76, both hemispheres
339.0
2746
Female, age 85, left hemisphere
262.0
2036
Male, age 80, both hemispheres
260.1
2320
Female, age 91, left hemisphere
171.4
Lateral parabrachial nucleus nTPM: 185.2
2139
Female, age 85, right hemisphere
292.9
2790
Male, age 61, both hemispheres
214.7
2013
Male, age 80, both hemispheres
163.0
2792
Male, age 76, both hemispheres
70.1
Lateral vestibular nucleus nTPM: 189.2
2184
Male, age 76, both hemispheres
218.7
2311
Male, age 80, both hemispheres
159.7
Locus coeruleus nTPM: 260.6
2123
Female, age 91, both hemispheres
322.4
2720
Male, age 74, both hemispheres
317.5
2014
Male, age 55, unknown
260.3
2317
Female, age 72, unknown
248.2
2162
Male, age 80, both hemispheres
233.4
1980
Male, age 76, both hemispheres
233.3
2788
Male, age 74, unknown
208.9
Medial parabrachial nucleus nTPM: 177.8
2156
Male, age 61, both hemispheres
223.6
2854
Male, age 80, both hemispheres
192.2
2786
Male, age 76, both hemispheres
176.1
2170
Female, age 91, both hemispheres
172.4
2463
Female, age 85, right hemisphere
124.6
Medial periolivary nuclei nTPM: 251.4
2171
Female, age 85, both hemispheres
373.7
2063
Male, age 76, both hemispheres
357.0
2791
Male, age 74, right hemisphere
243.4
2458
Female, age 91, both hemispheres
150.1
2081
Male, age 80, both hemispheres
132.9
Motor facial nucleus nTPM: 257.5
2062
Male, age 76, both hemispheres
382.2
2365
Male, age 74, right hemisphere
287.6
2327
Male, age 80, both hemispheres
255.4
2795
Female, age 91, both hemispheres
232.3
2697
Female, age 85, both hemispheres
227.0
2126
Male, age 61, both hemispheres
160.6
Motor trigeminal nucleus nTPM: 217.4
2560
Male, age 74, both hemispheres
278.0
2079
Male, age 80, both hemispheres
246.2
2335
Male, age 61, both hemispheres
221.0
2309
Male, age 76, both hemispheres
208.2
2321
Female, age 91, both hemispheres
133.5
Nuclei of the trapezoid body nTPM: 300.4
2735
Female, age 85, both hemispheres
388.1
2159
Male, age 61, both hemispheres
385.0
1983
Male, age 76, both hemispheres
327.2
2166
Male, age 80, both hemispheres
207.3
2368
Female, age 91, both hemispheres
194.3
Nucleus raphe magnus nTPM: 311.9
2160
Male, age 61, both hemispheres
438.3
2172
Female, age 85, both hemispheres
411.8
2455
Male, age 74, both hemispheres
349.9
2051
Male, age 76, both hemispheres
255.4
2328
Male, age 80, both hemispheres
236.1
2459
Female, age 91, both hemispheres
180.2
Paramedian reticular nucleus nTPM: 226.5
2050
Female, age 85, both hemispheres
291.1
2313
Male, age 61, both hemispheres
254.5
2057
Male, age 80, both hemispheres
236.5
2052
Male, age 76, both hemispheres
124.0
Pedunculopontine tegmental nucleus nTPM: 178.4
1921
Female, age 85, both hemispheres
213.4
2334
Male, age 80, both hemispheres
191.8
2338
Male, age 61, both hemispheres
130.0
Pontine nuclei nTPM: 289.5
2787
Female, age 85, both hemispheres
481.8
2727
Male, age 61, right hemisphere
363.9
1863
Male, age 55, unknown
351.0
1968
Male, age 76, left hemisphere
328.0
2109
Female, age 72, unknown
291.8
2454
Male, age 74, left hemisphere
203.0
2115
Male, age 80, left hemisphere
171.3
2319
Female, age 91, both hemispheres
125.3
Pontine raphe nucleus nTPM: 265.7
2122
Female, age 85, midline
314.3
2853
Male, age 76, midline
217.2
Posteroventral cochlear nucleus nTPM: 136.7
2752
Female, age 85, both hemispheres
267.2
2070
Male, age 76, both hemispheres
185.6
2371
Male, age 61, both hemispheres
146.7
2341
Male, age 80, both hemispheres
56.1
2135
Female, age 91, both hemispheres
27.8
Principal sensory trigeminal nucleus nTPM: 248.7
2158
Male, age 61, both hemispheres
387.2
2008
Male, age 80, left hemisphere
291.6
2324
Male, age 76, both hemispheres
177.1
2367
Female, age 91, left hemisphere
139.1
Reticular pontine nucleus, caudal nTPM: 205.6
2332
Male, age 80, right hemisphere
288.8
2092
Male, age 76, both hemispheres
242.3
2457
Female, age 91, both hemispheres
147.3
2559
Male, age 74, both hemispheres
143.9
Reticular pontine nucleus, oral nTPM: 188.6
2012
Female, age 85, both hemispheres
256.8
2361
Male, age 74, both hemispheres
233.9
2167
Male, age 76, both hemispheres
163.9
1939
Male, age 80, both hemispheres
158.7
2366
Female, age 91, both hemispheres
129.9
Reticulotegmental nucleus nTPM: 196.2
2325
Male, age 76, both hemispheres
255.5
2452
Male, age 74, both hemispheres
210.2
2333
Male, age 80, both hemispheres
165.7
2322
Female, age 91, both hemispheres
153.5
Spinal trigeminal nucleus, oral nTPM: 206.9
2737
Female, age 85, both hemispheres
216.4
1978
Male, age 76, both hemispheres
216.0
2164
Male, age 80, both hemispheres
188.3
Subcoeruleus area nTPM: 215.3
2323
Female, age 91, left hemisphere
294.1
2089
Male, age 76, left hemisphere
240.8
1958
Male, age 80, both hemispheres
240.6
2451
Male, age 74, both hemispheres
192.8
2369
Female, age 85, left hemisphere
108.2
Superior olive nTPM: 250.4
1875
Female, age 85, both hemispheres
352.2
2020
Male, age 76, both hemispheres
241.5
2364
Male, age 74, right hemisphere
228.1
2329
Male, age 80, right hemisphere
220.0
2561
Female, age 91, both hemispheres
210.0
Ventral periolivary nuclei nTPM: 267.8
2130
Female, age 85, both hemispheres
344.2
2165
Male, age 80, both hemispheres
294.7
2794
Female, age 91, left hemisphere
222.6
2023
Male, age 76, both hemispheres
209.7
Ventrolateral tegmental area, A5 NE cell group nTPM: 213.7
2449
Male, age 74, both hemispheres
320.9
1959
Male, age 76, both hemispheres
262.7
2840
Female, age 85, both hemispheres
206.4
2161
Male, age 80, both hemispheres
195.3
2359
Male, age 61, both hemispheres
160.0
2456
Female, age 91, both hemispheres
137.1
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
90.9
Pig sample
Sample description
nTPM
Pons nTPM: 90.9
Samples: 4
Max nTPM: 107.2
Min nTPM: 75.7
Sample A
Female
107.2
Sample B
Female
75.7
Sample C
Male
87.7
Sample D
Male
92.9
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
