HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:17.6 nTPM
HPA Brain:38.2 nTPM
GTEx:17.6 nTPM
FANTOM5:44.7 Scaled Tags Per Million
Pig:21.9 nTPM
Mouse:60.9 nTPM
Allen mouse:3.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA058942
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 38.2
Sample id Sample description nTPM
Hippocampus
nTPM: 32.9
1898 Male, age 80, left hemisphere 36.8
2148 Female, age 91, left hemisphere 34.4
1911 Female, age 85, right hemisphere 34.2
2529 Female, age 94, left hemisphere 32.9
1855 Male, age 76, left hemisphere 30.0
2621 Female, age 67, right hemisphere 28.9
Dentate gyrus
nTPM: 33.3
1927 Female, age 91, both hemispheres 40.3
2531 Female, age 67, both hemispheres 37.6
2246 Female, age 85, both hemispheres 32.4
2528 Male, age 74, both hemispheres 32.3
2010 Male, age 76, both hemispheres 30.2
2530 Female, age 94, left hemisphere 27.4
Entorhinal gyrus
nTPM: 33.9
2613 Female, age 94, left hemisphere 39.6
1938 Female, age 85, left hemisphere 36.3
2686 Male, age 75, right hemisphere 36.1
2764 Male, age 80, right hemisphere 31.6
2117 Female, age 91, right hemisphere 30.5
1787 Male, age 76, left hemisphere 29.1
Hippocampus, CA1
nTPM: 37.9
2749 Male, age 80, left hemisphere 43.0
2527 Male, age 74, both hemispheres 39.1
1873 Female, age 85, both hemispheres 37.0
2045 Male, age 76, both hemispheres 36.0
2082 Female, age 91, right hemisphere 34.4
Hippocampus, CA2
nTPM: 34.7
2249 Male, age 74, both hemispheres 39.4
1892 Male, age 76, both hemispheres 39.0
1963 Male, age 80, left hemisphere 34.6
2113 Female, age 91, right hemisphere 32.8
2437 Female, age 94, left hemisphere 31.6
1940 Female, age 85, left hemisphere 30.9
Hippocampus, CA3
nTPM: 37.9
2436 Male, age 74, both hemispheres 47.3
2137 Male, age 80, left hemisphere 43.3
2620 Female, age 94, left hemisphere 39.2
1867 Male, age 76, both hemispheres 35.3
1891 Female, age 85, both hemispheres 32.2
2861 Female, age 67, both hemispheres 30.0
Parahippocampal cortex
nTPM: 35.1
2693 Female, age 94, both hemispheres 42.4
1850 Male, age 80, both hemispheres 37.8
1933 Female, age 85, both hemispheres 36.8
2532 Female, age 72, left hemisphere 36.5
2245 Female, age 91, both hemispheres 36.3
2692 Male, age 74, both hemispheres 35.5
2250 Female, age 67, right hemisphere 33.9
2622 Female, age 67, right hemisphere 31.9
2018 Male, age 76, both hemispheres 30.3
1990 Female, age 91, right hemisphere 29.7
Perirhinal gyrus
nTPM: 38.2
1841 Female, age 85, right hemisphere 41.1
1847 Female, age 91, left hemisphere 41.1
2521 Female, age 94, right hemisphere 36.5
1794 Male, age 80, right hemisphere 36.3
2848 Male, age 76, right hemisphere 36.0
Subiculum
nTPM: 30.4
2729 Female, age 91, right hemisphere 35.8
1901 Male, age 80, both hemispheres 35.2
2619 Male, age 74, both hemispheres 33.4
1977 Female, age 85, both hemispheres 29.7
2042 Male, age 76, both hemispheres 24.2
2438 Female, age 94, left hemisphere 23.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 17.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 17.6
Samples: 197

Max nTPM: 36.9
Min nTPM: 2.8
Std nTPM: 7.4
Median nTPM: 17.2
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 36.9
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 35.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 34.6
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 34.1
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 33.4
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 33.0
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 32.9
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 32.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 32.7
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 31.1
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 30.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 44.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 44.7
FF:10169-103B7 60 years, female 47.7
FF:10153-102I9 76 years, female 41.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 21.9
Pig sample Sample description nTPM
Subiculum
nTPM: 21.9
Samples: 4

Max nTPM: 24.6
Min nTPM: 19.3
Sample A Female 19.3
Sample B Female 20.1
Sample C Male 23.4
Sample D Male 24.6
Dorsal hippocampus
nTPM: 20.7
Samples: 4

Max nTPM: 22.3
Min nTPM: 19.5
Sample A Female 19.8
Sample B Female 19.5
Sample C Male 21.1
Sample D Male 22.3
Entorhinal cortex
nTPM: 20.2
Samples: 4

Max nTPM: 20.9
Min nTPM: 19.1
Sample A Female 19.1
Sample B Female 20.9
Sample C Male 19.9
Sample D Male 20.7
Ventral hippocampus
nTPM: 19.3
Samples: 4

Max nTPM: 22.8
Min nTPM: 15.6
Sample A Female 20.2
Sample B Female 22.8
Sample C Male 15.6
Sample D Male 18.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 60.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 61.0
Samples: 4

Max nTPM: 67.4
Min nTPM: 52.9
Sample A Male 58.7
Sample B Male 67.4
Sample C Female 64.8
Sample D Female 52.9
Hippocampal formation
nTPM: 58.7
Samples: 4

Max nTPM: 73.6
Min nTPM: 48.8
Sample A Male 73.6
Sample B Male 57.6
Sample C Female 48.8
Sample D Female 54.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.0
587419 Antisense, RP_040831_01_F02, Mouse strain C57BL/6J (56 days, male) 3.0

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