HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:21.8 nTPM
HPA Brain:35.2 nTPM
GTEx:21.8 nTPM
FANTOM5:9.5 Scaled Tags Per Million
Pig:20.9 nTPM
Mouse:21.4 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPUS - Antibody stainingi
Antibody HPA077724
Glial cells Medium
Neuronal cells High


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 35.2
Sample id Sample description nTPM
Hippocampus
nTPM: 27.7
2621 Female, age 67, right hemisphere 34.8
1898 Male, age 80, left hemisphere 34.5
2148 Female, age 91, left hemisphere 27.5
1855 Male, age 76, left hemisphere 27.1
2529 Female, age 94, left hemisphere 22.7
1911 Female, age 85, right hemisphere 19.3
Dentate gyrus
nTPM: 31.3
1927 Female, age 91, both hemispheres 39.5
2530 Female, age 94, left hemisphere 37.7
2531 Female, age 67, both hemispheres 33.6
2010 Male, age 76, both hemispheres 28.7
2246 Female, age 85, both hemispheres 25.1
2528 Male, age 74, both hemispheres 23.4
Entorhinal gyrus
nTPM: 31.2
2613 Female, age 94, left hemisphere 42.4
2764 Male, age 80, right hemisphere 37.4
1787 Male, age 76, left hemisphere 32.1
1938 Female, age 85, left hemisphere 30.0
2686 Male, age 75, right hemisphere 26.9
2117 Female, age 91, right hemisphere 18.2
Hippocampus, CA1
nTPM: 28.8
2749 Male, age 80, left hemisphere 49.1
1873 Female, age 85, both hemispheres 29.4
2045 Male, age 76, both hemispheres 23.5
2527 Male, age 74, both hemispheres 21.9
2082 Female, age 91, right hemisphere 20.1
Hippocampus, CA2
nTPM: 28.4
1963 Male, age 80, left hemisphere 44.3
1892 Male, age 76, both hemispheres 36.7
2437 Female, age 94, left hemisphere 35.2
2113 Female, age 91, right hemisphere 18.7
1940 Female, age 85, left hemisphere 18.0
2249 Male, age 74, both hemispheres 17.2
Hippocampus, CA3
nTPM: 27.8
2861 Female, age 67, both hemispheres 37.8
2137 Male, age 80, left hemisphere 35.0
2620 Female, age 94, left hemisphere 29.7
1867 Male, age 76, both hemispheres 26.6
1891 Female, age 85, both hemispheres 20.4
2436 Male, age 74, both hemispheres 17.2
Parahippocampal cortex
nTPM: 28.8
1990 Female, age 91, right hemisphere 35.8
2245 Female, age 91, both hemispheres 34.6
2250 Female, age 67, right hemisphere 31.8
2622 Female, age 67, right hemisphere 31.4
1850 Male, age 80, both hemispheres 29.5
1933 Female, age 85, both hemispheres 28.2
2693 Female, age 94, both hemispheres 27.4
2532 Female, age 72, left hemisphere 26.8
2018 Male, age 76, both hemispheres 21.6
2692 Male, age 74, both hemispheres 20.5
Perirhinal gyrus
nTPM: 35.2
1847 Female, age 91, left hemisphere 42.5
1794 Male, age 80, right hemisphere 39.9
2521 Female, age 94, right hemisphere 32.6
1841 Female, age 85, right hemisphere 31.9
2848 Male, age 76, right hemisphere 29.3
Subiculum
nTPM: 23.0
1977 Female, age 85, both hemispheres 31.2
2438 Female, age 94, left hemisphere 26.6
2619 Male, age 74, both hemispheres 25.3
1901 Male, age 80, both hemispheres 23.8
2729 Female, age 91, right hemisphere 16.8
2042 Male, age 76, both hemispheres 14.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 21.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 21.8
Samples: 197

Max nTPM: 51.7
Min nTPM: 1.1
Std nTPM: 11.8
Median nTPM: 20.9
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 51.7
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 51.0
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 50.6
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 49.7
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 48.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 48.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 46.7
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 46.2
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 44.5
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 44.1
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 42.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 9.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 9.5
FF:10153-102I9 76 years, female 10.6
FF:10169-103B7 60 years, female 8.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 20.9
Pig sample Sample description nTPM
Subiculum
nTPM: 18.7
Samples: 4

Max nTPM: 22.0
Min nTPM: 15.8
Sample A Female 22.0
Sample B Female 15.8
Sample C Male 18.5
Sample D Male 18.6
Dorsal hippocampus
nTPM: 20.4
Samples: 4

Max nTPM: 23.7
Min nTPM: 16.7
Sample A Female 23.6
Sample B Female 23.7
Sample C Male 17.7
Sample D Male 16.7
Entorhinal cortex
nTPM: 19.5
Samples: 4

Max nTPM: 22.8
Min nTPM: 16.5
Sample A Female 22.8
Sample B Female 20.9
Sample C Male 17.7
Sample D Male 16.5
Ventral hippocampus
nTPM: 20.9
Samples: 4

Max nTPM: 26.2
Min nTPM: 14.0
Sample A Female 20.1
Sample B Female 14.0
Sample C Male 26.2
Sample D Male 23.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 21.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 20.8
Samples: 4

Max nTPM: 22.9
Min nTPM: 19.0
Sample A Male 22.0
Sample B Male 22.9
Sample C Female 19.4
Sample D Female 19.0
Hippocampal formation
nTPM: 21.4
Samples: 4

Max nTPM: 24.3
Min nTPM: 19.4
Sample A Male 19.6
Sample B Male 22.4
Sample C Female 19.4
Sample D Female 24.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
71764150 Antisense, RP_050921_03_C10, Mouse strain C57BL/6J (56 days, male) 0.0

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