HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:94.7 nTPM
HPA Brain:32.8 nTPM
GTEx:94.7 nTPM
FANTOM5:246.0 Scaled Tags Per Million
Mouse:386.1 nTPM
Allen mouse:21.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA004136
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 32.8
Sample id Sample description nTPM
Hippocampus
nTPM: 29.6
1898 Male, age 80, left hemisphere 33.5
2529 Female, age 94, left hemisphere 32.2
1855 Male, age 76, left hemisphere 30.4
2621 Female, age 67, right hemisphere 28.7
1911 Female, age 85, right hemisphere 26.7
2148 Female, age 91, left hemisphere 25.9
Dentate gyrus
nTPM: 32.8
2530 Female, age 94, left hemisphere 39.9
2010 Male, age 76, both hemispheres 38.2
1927 Female, age 91, both hemispheres 32.7
2528 Male, age 74, both hemispheres 31.0
2531 Female, age 67, both hemispheres 28.4
2246 Female, age 85, both hemispheres 26.6
Entorhinal gyrus
nTPM: 31.9
2613 Female, age 94, left hemisphere 35.6
1938 Female, age 85, left hemisphere 33.8
1787 Male, age 76, left hemisphere 33.7
2764 Male, age 80, right hemisphere 31.3
2117 Female, age 91, right hemisphere 28.6
2686 Male, age 75, right hemisphere 28.5
Hippocampus, CA1
nTPM: 31.5
2749 Male, age 80, left hemisphere 38.1
2045 Male, age 76, both hemispheres 34.1
1873 Female, age 85, both hemispheres 30.0
2082 Female, age 91, right hemisphere 28.1
2527 Male, age 74, both hemispheres 27.3
Hippocampus, CA2
nTPM: 31.5
1892 Male, age 76, both hemispheres 36.7
1963 Male, age 80, left hemisphere 36.4
2437 Female, age 94, left hemisphere 35.6
2249 Male, age 74, both hemispheres 32.0
2113 Female, age 91, right hemisphere 27.2
1940 Female, age 85, left hemisphere 21.2
Hippocampus, CA3
nTPM: 30.5
1867 Male, age 76, both hemispheres 41.8
2620 Female, age 94, left hemisphere 30.7
2137 Male, age 80, left hemisphere 29.7
1891 Female, age 85, both hemispheres 28.3
2436 Male, age 74, both hemispheres 28.1
2861 Female, age 67, both hemispheres 24.5
Parahippocampal cortex
nTPM: 27.5
2018 Male, age 76, both hemispheres 40.6
2250 Female, age 67, right hemisphere 29.3
1990 Female, age 91, right hemisphere 27.7
2532 Female, age 72, left hemisphere 27.0
2692 Male, age 74, both hemispheres 26.9
1850 Male, age 80, both hemispheres 26.6
2245 Female, age 91, both hemispheres 25.6
2622 Female, age 67, right hemisphere 25.4
1933 Female, age 85, both hemispheres 25.2
2693 Female, age 94, both hemispheres 21.1
Perirhinal gyrus
nTPM: 29.4
1847 Female, age 91, left hemisphere 35.1
1841 Female, age 85, right hemisphere 32.5
2848 Male, age 76, right hemisphere 28.3
1794 Male, age 80, right hemisphere 27.4
2521 Female, age 94, right hemisphere 23.5
Subiculum
nTPM: 30.7
1977 Female, age 85, both hemispheres 36.4
2438 Female, age 94, left hemisphere 33.6
2042 Male, age 76, both hemispheres 32.1
1901 Male, age 80, both hemispheres 28.0
2729 Female, age 91, right hemisphere 27.8
2619 Male, age 74, both hemispheres 26.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 94.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 94.7
Samples: 197

Max nTPM: 220.8
Min nTPM: 41.6
Std nTPM: 27.9
Median nTPM: 89.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 220.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 195.7
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 181.0
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 178.0
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 168.1
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 166.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 162.1
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 159.0
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 157.7
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 156.8
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 156.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 246.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 246.0
FF:10169-103B7 60 years, female 412.3
FF:10153-102I9 76 years, female 79.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 386.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 358.3
Samples: 4

Max nTPM: 371.4
Min nTPM: 338.6
Sample A Male 365.5
Sample B Male 338.6
Sample C Female 371.4
Sample D Female 357.7
Hippocampal formation
nTPM: 386.1
Samples: 4

Max nTPM: 443.5
Min nTPM: 349.2
Sample A Male 443.5
Sample B Male 349.2
Sample C Female 359.8
Sample D Female 391.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 21.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 21.4
70946135 Antisense, RP_050303_02_H11, Mouse strain C57BL/6J (56 days, male) 21.4

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