HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni
Consensus:12.8 nTPM
HPA Brain:22.5 nTPM
GTEx:12.8 nTPM
FANTOM5:4.3 Scaled Tags Per Million
Pig:5.9 nTPM
Mouse:5.3 nTPM
Allen mouse:9.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043469
Glial cells Not detected
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 22.5
Sample id Sample description nTPM
Hippocampus
nTPM: 13.5
2148 Female, age 91, left hemisphere 17.8
2621 Female, age 67, right hemisphere 14.1
1855 Male, age 76, left hemisphere 14.0
1911 Female, age 85, right hemisphere 12.6
1898 Male, age 80, left hemisphere 11.8
2529 Female, age 94, left hemisphere 10.9
Dentate gyrus
nTPM: 13.5
2531 Female, age 67, both hemispheres 25.9
1927 Female, age 91, both hemispheres 15.9
2246 Female, age 85, both hemispheres 12.9
2528 Male, age 74, both hemispheres 11.5
2010 Male, age 76, both hemispheres 9.5
2530 Female, age 94, left hemisphere 5.5
Entorhinal gyrus
nTPM: 10.9
2764 Male, age 80, right hemisphere 13.3
2686 Male, age 75, right hemisphere 13.0
1787 Male, age 76, left hemisphere 12.4
2613 Female, age 94, left hemisphere 9.8
1938 Female, age 85, left hemisphere 9.5
2117 Female, age 91, right hemisphere 7.1
Hippocampus, CA1
nTPM: 15.3
2749 Male, age 80, left hemisphere 19.8
2045 Male, age 76, both hemispheres 18.6
2527 Male, age 74, both hemispheres 15.8
2082 Female, age 91, right hemisphere 12.7
1873 Female, age 85, both hemispheres 9.8
Hippocampus, CA2
nTPM: 11.0
1940 Female, age 85, left hemisphere 13.9
2249 Male, age 74, both hemispheres 13.3
2113 Female, age 91, right hemisphere 12.3
2437 Female, age 94, left hemisphere 9.3
1892 Male, age 76, both hemispheres 9.0
1963 Male, age 80, left hemisphere 8.0
Hippocampus, CA3
nTPM: 22.5
2620 Female, age 94, left hemisphere 30.8
2436 Male, age 74, both hemispheres 30.5
2137 Male, age 80, left hemisphere 24.6
2861 Female, age 67, both hemispheres 24.6
1867 Male, age 76, both hemispheres 12.9
1891 Female, age 85, both hemispheres 11.3
Parahippocampal cortex
nTPM: 12.3
2622 Female, age 67, right hemisphere 14.9
2693 Female, age 94, both hemispheres 14.6
2250 Female, age 67, right hemisphere 14.0
1933 Female, age 85, both hemispheres 12.6
2245 Female, age 91, both hemispheres 12.5
1850 Male, age 80, both hemispheres 12.4
2532 Female, age 72, left hemisphere 12.3
1990 Female, age 91, right hemisphere 11.1
2018 Male, age 76, both hemispheres 10.9
2692 Male, age 74, both hemispheres 7.2
Perirhinal gyrus
nTPM: 13.5
2521 Female, age 94, right hemisphere 17.3
2848 Male, age 76, right hemisphere 15.9
1794 Male, age 80, right hemisphere 13.2
1847 Female, age 91, left hemisphere 11.2
1841 Female, age 85, right hemisphere 9.8
Subiculum
nTPM: 10.1
2729 Female, age 91, right hemisphere 15.3
1901 Male, age 80, both hemispheres 13.6
2042 Male, age 76, both hemispheres 9.4
2619 Male, age 74, both hemispheres 8.7
1977 Female, age 85, both hemispheres 8.4
2438 Female, age 94, left hemisphere 5.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 12.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 12.8
Samples: 197

Max nTPM: 80.4
Min nTPM: 2.0
Std nTPM: 10.0
Median nTPM: 9.8
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 80.4
GTEX-1C64N-0011-R1b-SM-7P8Q7 50-59 years, male 59.3
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 55.0
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 43.0
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 39.8
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 38.6
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 38.3
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 35.9
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 35.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 34.1
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 31.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 4.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 4.3
FF:10169-103B7 60 years, female 6.2
FF:10153-102I9 76 years, female 2.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 5.9
Pig sample Sample description nTPM
Subiculum
nTPM: 5.9
Samples: 4

Max nTPM: 7.6
Min nTPM: 4.2
Sample A Female 4.2
Sample B Female 5.1
Sample C Male 6.8
Sample D Male 7.6
Dorsal hippocampus
nTPM: 4.6
Samples: 4

Max nTPM: 5.3
Min nTPM: 3.7
Sample A Female 3.7
Sample B Female 4.7
Sample C Male 5.3
Sample D Male 4.6
Entorhinal cortex
nTPM: 5.5
Samples: 4

Max nTPM: 6.5
Min nTPM: 4.4
Sample A Female 6.5
Sample B Female 5.8
Sample C Male 5.1
Sample D Male 4.4
Ventral hippocampus
nTPM: 5.9
Samples: 4

Max nTPM: 6.8
Min nTPM: 4.4
Sample A Female 6.8
Sample B Female 6.2
Sample C Male 6.1
Sample D Male 4.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 5.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 2.6
Samples: 4

Max nTPM: 3.8
Min nTPM: 1.9
Sample A Male 3.8
Sample B Male 1.9
Sample C Female 2.2
Sample D Female 2.5
Hippocampal formation
nTPM: 5.3
Samples: 4

Max nTPM: 7.1
Min nTPM: 3.7
Sample A Male 4.1
Sample B Male 3.7
Sample C Female 6.2
Sample D Female 7.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.0
68545009 Antisense, RP_050118_02_G04, Mouse strain C57BL/6J (56 days, male) 9.0

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