HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:73.5 nTPM
HPA Brain:179.4 nTPM
GTEx:73.5 nTPM
FANTOM5:223.3 Scaled Tags Per Million
Pig:107.9 nTPM
Mouse:118.5 nTPM
Allen mouse:13.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA031970
Glial cells Medium
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 179.4
Sample id Sample description nTPM
Hippocampus
nTPM: 92.9
1898 Male, age 80, left hemisphere 131.0
2148 Female, age 91, left hemisphere 96.1
2621 Female, age 67, right hemisphere 94.3
1855 Male, age 76, left hemisphere 84.0
1911 Female, age 85, right hemisphere 80.9
2529 Female, age 94, left hemisphere 71.0
Dentate gyrus
nTPM: 106.3
1927 Female, age 91, both hemispheres 161.7
2531 Female, age 67, both hemispheres 102.2
2246 Female, age 85, both hemispheres 101.6
2010 Male, age 76, both hemispheres 95.9
2528 Male, age 74, both hemispheres 89.6
2530 Female, age 94, left hemisphere 86.6
Entorhinal gyrus
nTPM: 115.5
1938 Female, age 85, left hemisphere 147.1
2764 Male, age 80, right hemisphere 135.3
1787 Male, age 76, left hemisphere 127.7
2613 Female, age 94, left hemisphere 127.0
2686 Male, age 75, right hemisphere 84.2
2117 Female, age 91, right hemisphere 71.9
Hippocampus, CA1
nTPM: 119.9
2749 Male, age 80, left hemisphere 186.2
1873 Female, age 85, both hemispheres 112.8
2082 Female, age 91, right hemisphere 107.1
2045 Male, age 76, both hemispheres 98.0
2527 Male, age 74, both hemispheres 95.3
Hippocampus, CA2
nTPM: 108.2
1892 Male, age 76, both hemispheres 136.6
1963 Male, age 80, left hemisphere 116.3
1940 Female, age 85, left hemisphere 111.9
2113 Female, age 91, right hemisphere 99.9
2437 Female, age 94, left hemisphere 92.5
2249 Male, age 74, both hemispheres 91.9
Hippocampus, CA3
nTPM: 120.2
2137 Male, age 80, left hemisphere 170.9
2620 Female, age 94, left hemisphere 142.1
2436 Male, age 74, both hemispheres 122.7
1867 Male, age 76, both hemispheres 105.7
2861 Female, age 67, both hemispheres 94.8
1891 Female, age 85, both hemispheres 84.9
Parahippocampal cortex
nTPM: 121.6
1850 Male, age 80, both hemispheres 169.5
2245 Female, age 91, both hemispheres 145.3
1990 Female, age 91, right hemisphere 145.1
2250 Female, age 67, right hemisphere 127.1
2693 Female, age 94, both hemispheres 125.8
1933 Female, age 85, both hemispheres 124.3
2532 Female, age 72, left hemisphere 118.6
2622 Female, age 67, right hemisphere 94.6
2018 Male, age 76, both hemispheres 91.8
2692 Male, age 74, both hemispheres 73.8
Perirhinal gyrus
nTPM: 179.4
1847 Female, age 91, left hemisphere 215.1
1794 Male, age 80, right hemisphere 202.5
1841 Female, age 85, right hemisphere 177.1
2521 Female, age 94, right hemisphere 163.0
2848 Male, age 76, right hemisphere 139.2
Subiculum
nTPM: 88.7
1977 Female, age 85, both hemispheres 123.8
1901 Male, age 80, both hemispheres 109.8
2438 Female, age 94, left hemisphere 82.1
2042 Male, age 76, both hemispheres 74.5
2619 Male, age 74, both hemispheres 73.3
2729 Female, age 91, right hemisphere 68.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 73.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 73.5
Samples: 197

Max nTPM: 243.7
Min nTPM: 10.3
Std nTPM: 39.3
Median nTPM: 69.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 243.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 235.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 169.4
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 167.6
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 150.7
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 145.2
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 142.4
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 140.1
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 135.5
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 135.5
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 133.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 223.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 223.3
FF:10169-103B7 60 years, female 279.3
FF:10153-102I9 76 years, female 167.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 107.9
Pig sample Sample description nTPM
Subiculum
nTPM: 99.5
Samples: 4

Max nTPM: 129.5
Min nTPM: 79.1
Sample A Female 129.5
Sample B Female 86.9
Sample C Male 102.5
Sample D Male 79.1
Dorsal hippocampus
nTPM: 107.7
Samples: 4

Max nTPM: 137.2
Min nTPM: 84.3
Sample A Female 137.2
Sample B Female 123.0
Sample C Male 84.3
Sample D Male 86.2
Entorhinal cortex
nTPM: 93.5
Samples: 4

Max nTPM: 98.3
Min nTPM: 84.6
Sample A Female 96.9
Sample B Female 94.1
Sample C Male 98.3
Sample D Male 84.6
Ventral hippocampus
nTPM: 107.9
Samples: 4

Max nTPM: 124.2
Min nTPM: 76.9
Sample A Female 109.8
Sample B Female 76.9
Sample C Male 124.2
Sample D Male 120.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 118.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 109.3
Samples: 4

Max nTPM: 117.0
Min nTPM: 102.3
Sample A Male 107.8
Sample B Male 110.2
Sample C Female 102.3
Sample D Female 117.0
Hippocampal formation
nTPM: 118.5
Samples: 4

Max nTPM: 128.3
Min nTPM: 106.0
Sample A Male 117.6
Sample B Male 122.0
Sample C Female 128.3
Sample D Female 106.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 13.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 13.7
393194 Antisense, RP_040804_02_C02, Mouse strain C57BL/6J (56 days, male) 13.7

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