HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
RNA expressioni
Consensus:13.7 nTPM
HPA Brain:29.6 nTPM
GTEx:13.7 nTPM
FANTOM5:89.5 Scaled Tags Per Million
Pig:21.4 nTPM
Mouse:18.7 nTPM
Allen mouse:0.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA012542Antibody CAB009329Antibody CAB015217
Glial cells Not detectedNot detectedMedium
Neuronal cells Not detectedLowNot detected







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 29.6
Sample id Sample description nTPM
Hippocampus
nTPM: 25.8
2148 Female, age 91, left hemisphere 29.3
1855 Male, age 76, left hemisphere 28.3
1898 Male, age 80, left hemisphere 27.1
2621 Female, age 67, right hemisphere 26.4
1911 Female, age 85, right hemisphere 24.6
2529 Female, age 94, left hemisphere 19.0
Dentate gyrus
nTPM: 24.2
2010 Male, age 76, both hemispheres 28.2
1927 Female, age 91, both hemispheres 28.1
2531 Female, age 67, both hemispheres 23.0
2530 Female, age 94, left hemisphere 22.8
2246 Female, age 85, both hemispheres 22.3
2528 Male, age 74, both hemispheres 20.8
Entorhinal gyrus
nTPM: 19.0
2764 Male, age 80, right hemisphere 19.8
2686 Male, age 75, right hemisphere 19.6
1787 Male, age 76, left hemisphere 19.0
2117 Female, age 91, right hemisphere 19.0
1938 Female, age 85, left hemisphere 18.4
2613 Female, age 94, left hemisphere 18.2
Hippocampus, CA1
nTPM: 29.6
2749 Male, age 80, left hemisphere 46.2
2045 Male, age 76, both hemispheres 31.3
1873 Female, age 85, both hemispheres 26.6
2082 Female, age 91, right hemisphere 21.9
2527 Male, age 74, both hemispheres 21.9
Hippocampus, CA2
nTPM: 23.3
1963 Male, age 80, left hemisphere 33.9
1892 Male, age 76, both hemispheres 24.3
2249 Male, age 74, both hemispheres 22.0
2113 Female, age 91, right hemisphere 21.4
1940 Female, age 85, left hemisphere 19.8
2437 Female, age 94, left hemisphere 18.4
Hippocampus, CA3
nTPM: 28.6
2137 Male, age 80, left hemisphere 40.9
2436 Male, age 74, both hemispheres 29.5
1867 Male, age 76, both hemispheres 27.8
2861 Female, age 67, both hemispheres 26.8
2620 Female, age 94, left hemisphere 24.7
1891 Female, age 85, both hemispheres 22.1
Parahippocampal cortex
nTPM: 19.9
2245 Female, age 91, both hemispheres 24.7
2532 Female, age 72, left hemisphere 22.3
2622 Female, age 67, right hemisphere 20.9
2018 Male, age 76, both hemispheres 20.6
1850 Male, age 80, both hemispheres 20.3
1933 Female, age 85, both hemispheres 19.1
2692 Male, age 74, both hemispheres 18.4
2693 Female, age 94, both hemispheres 18.4
1990 Female, age 91, right hemisphere 18.0
2250 Female, age 67, right hemisphere 16.8
Perirhinal gyrus
nTPM: 20.5
2521 Female, age 94, right hemisphere 23.6
1794 Male, age 80, right hemisphere 20.3
1841 Female, age 85, right hemisphere 20.1
1847 Female, age 91, left hemisphere 19.7
2848 Male, age 76, right hemisphere 18.9
Subiculum
nTPM: 21.5
1901 Male, age 80, both hemispheres 25.2
2042 Male, age 76, both hemispheres 25.1
2729 Female, age 91, right hemisphere 23.4
2438 Female, age 94, left hemisphere 19.1
1977 Female, age 85, both hemispheres 18.1
2619 Male, age 74, both hemispheres 18.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 13.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 13.7
Samples: 197

Max nTPM: 25.0
Min nTPM: 7.3
Std nTPM: 3.5
Median nTPM: 13.8
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 25.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 24.2
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 23.9
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 22.8
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 21.6
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 21.6
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 21.2
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 21.1
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 21.1
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 21.0
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 20.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 89.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 89.5
FF:10169-103B7 60 years, female 112.1
FF:10153-102I9 76 years, female 66.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 21.4
Pig sample Sample description nTPM
Subiculum
nTPM: 16.6
Samples: 4

Max nTPM: 18.3
Min nTPM: 15.0
Sample A Female 18.3
Sample B Female 16.7
Sample C Male 16.4
Sample D Male 15.0
Dorsal hippocampus
nTPM: 21.4
Samples: 4

Max nTPM: 24.5
Min nTPM: 18.3
Sample A Female 24.5
Sample B Female 21.0
Sample C Male 21.9
Sample D Male 18.3
Entorhinal cortex
nTPM: 17.0
Samples: 4

Max nTPM: 18.8
Min nTPM: 16.2
Sample A Female 18.8
Sample B Female 16.2
Sample C Male 16.6
Sample D Male 16.5
Ventral hippocampus
nTPM: 19.3
Samples: 4

Max nTPM: 20.5
Min nTPM: 16.4
Sample A Female 20.2
Sample B Female 16.4
Sample C Male 20.5
Sample D Male 19.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 18.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 16.3
Samples: 4

Max nTPM: 18.3
Min nTPM: 14.8
Sample A Male 14.8
Sample B Male 18.3
Sample C Female 16.3
Sample D Female 15.7
Hippocampal formation
nTPM: 18.7
Samples: 4

Max nTPM: 21.1
Min nTPM: 17.0
Sample A Male 17.0
Sample B Male 19.7
Sample C Female 21.1
Sample D Female 17.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
76003580 Antisense, RP_060608_02_G08, Mouse strain C57BL/6J (56 days, male) 0.5

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