HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:143.5 nTPM
HPA Brain:204.1 nTPM
GTEx:143.5 nTPM
FANTOM5:167.8 Scaled Tags Per Million
Pig:182.0 nTPM
Mouse:136.8 nTPM
Allen mouse:6.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA018849Antibody HPA019536Antibody CAB033987
Glial cells Not detectedMediumLow
Neuronal cells LowNot detectedNot detected







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 204.1
Sample id Sample description nTPM
Hippocampus
nTPM: 131.2
2621 Female, age 67, right hemisphere 152.9
2148 Female, age 91, left hemisphere 140.1
1898 Male, age 80, left hemisphere 131.8
1855 Male, age 76, left hemisphere 121.0
2529 Female, age 94, left hemisphere 120.9
1911 Female, age 85, right hemisphere 120.6
Dentate gyrus
nTPM: 123.5
2531 Female, age 67, both hemispheres 153.3
1927 Female, age 91, both hemispheres 145.1
2246 Female, age 85, both hemispheres 117.6
2010 Male, age 76, both hemispheres 112.3
2528 Male, age 74, both hemispheres 108.1
2530 Female, age 94, left hemisphere 104.8
Entorhinal gyrus
nTPM: 198.3
2613 Female, age 94, left hemisphere 292.0
2686 Male, age 75, right hemisphere 202.4
1938 Female, age 85, left hemisphere 200.7
1787 Male, age 76, left hemisphere 196.1
2764 Male, age 80, right hemisphere 174.0
2117 Female, age 91, right hemisphere 124.4
Hippocampus, CA1
nTPM: 134.6
2749 Male, age 80, left hemisphere 156.8
2045 Male, age 76, both hemispheres 148.4
2527 Male, age 74, both hemispheres 130.0
2082 Female, age 91, right hemisphere 128.6
1873 Female, age 85, both hemispheres 109.2
Hippocampus, CA2
nTPM: 135.3
2437 Female, age 94, left hemisphere 169.7
1892 Male, age 76, both hemispheres 167.5
1940 Female, age 85, left hemisphere 141.9
2113 Female, age 91, right hemisphere 130.6
1963 Male, age 80, left hemisphere 107.2
2249 Male, age 74, both hemispheres 94.8
Hippocampus, CA3
nTPM: 150.1
1867 Male, age 76, both hemispheres 174.8
2137 Male, age 80, left hemisphere 164.8
2620 Female, age 94, left hemisphere 162.4
2861 Female, age 67, both hemispheres 162.3
1891 Female, age 85, both hemispheres 123.5
2436 Male, age 74, both hemispheres 112.6
Parahippocampal cortex
nTPM: 185.7
2622 Female, age 67, right hemisphere 243.1
2693 Female, age 94, both hemispheres 212.3
1850 Male, age 80, both hemispheres 193.4
2018 Male, age 76, both hemispheres 183.1
2532 Female, age 72, left hemisphere 181.9
2245 Female, age 91, both hemispheres 174.7
1933 Female, age 85, both hemispheres 172.6
1990 Female, age 91, right hemisphere 172.5
2692 Male, age 74, both hemispheres 168.7
2250 Female, age 67, right hemisphere 155.0
Perirhinal gyrus
nTPM: 204.1
1847 Female, age 91, left hemisphere 232.4
1794 Male, age 80, right hemisphere 203.7
2848 Male, age 76, right hemisphere 195.8
1841 Female, age 85, right hemisphere 194.8
2521 Female, age 94, right hemisphere 193.6
Subiculum
nTPM: 140.9
2619 Male, age 74, both hemispheres 171.7
2438 Female, age 94, left hemisphere 154.4
1977 Female, age 85, both hemispheres 145.7
1901 Male, age 80, both hemispheres 134.7
2729 Female, age 91, right hemisphere 121.1
2042 Male, age 76, both hemispheres 117.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 143.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 143.5
Samples: 197

Max nTPM: 342.5
Min nTPM: 36.9
Std nTPM: 61.2
Median nTPM: 128.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 342.5
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 320.2
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 295.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 291.7
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 272.8
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 272.7
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 272.5
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 272.3
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 271.2
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 267.4
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 265.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 167.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 167.8
FF:10153-102I9 76 years, female 180.9
FF:10169-103B7 60 years, female 154.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 182.0
Pig sample Sample description nTPM
Subiculum
nTPM: 121.7
Samples: 4

Max nTPM: 172.2
Min nTPM: 102.7
Sample A Female 172.2
Sample B Female 107.4
Sample C Male 102.7
Sample D Male 104.6
Dorsal hippocampus
nTPM: 92.2
Samples: 4

Max nTPM: 110.1
Min nTPM: 80.9
Sample A Female 95.7
Sample B Female 80.9
Sample C Male 110.1
Sample D Male 82.1
Entorhinal cortex
nTPM: 182.0
Samples: 4

Max nTPM: 201.1
Min nTPM: 171.9
Sample A Female 175.0
Sample B Female 180.0
Sample C Male 201.1
Sample D Male 171.9
Ventral hippocampus
nTPM: 90.2
Samples: 4

Max nTPM: 113.6
Min nTPM: 65.0
Sample A Female 65.0
Sample B Female 78.1
Sample C Male 113.6
Sample D Male 103.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 136.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 136.8
Samples: 4

Max nTPM: 140.9
Min nTPM: 132.0
Sample A Male 132.0
Sample B Male 134.0
Sample C Female 140.9
Sample D Female 140.3
Hippocampal formation
nTPM: 91.9
Samples: 4

Max nTPM: 110.0
Min nTPM: 79.6
Sample A Male 110.0
Sample B Male 87.1
Sample C Female 79.6
Sample D Female 91.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.8
69838381 Antisense, RP_050301_02_G07, Mouse strain C57BL/6J (56 days, male) 6.8

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