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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
141.3
nTPM
FANTOM5:
204.9
Scaled Tags Per Million
Pig:
106.3
nTPM
Allen mouse:
7.0
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
141.3
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 116.4
2090
Male, age 80, both hemispheres
120.8
1984
Male, age 76, both hemispheres
118.3
2301
Female, age 85, both hemispheres
116.5
2188
Female, age 91, both hemispheres
109.9
Dorsal cochlear nucleus nTPM: 115.6
2370
Male, age 61, both hemispheres
133.1
2058
Male, age 76, both hemispheres
118.7
2187
Female, age 91, both hemispheres
117.4
2378
Male, age 80, both hemispheres
109.1
2802
Male, age 74, right hemisphere
99.5
Dorsal tegmental nucleus nTPM: 111.7
2358
Male, age 61, both hemispheres
135.7
1936
Male, age 76, left hemisphere
106.4
2083
Male, age 80, both hemispheres
105.1
2326
Male, age 74, both hemispheres
99.8
Dorsolateral tegmental area nTPM: 114.3
2141
Male, age 76, both hemispheres
141.0
2337
Male, age 61, both hemispheres
127.3
2654
Male, age 80, both hemispheres
105.3
2751
Female, age 85, both hemispheres
101.5
2360
Male, age 74, both hemispheres
96.1
Kolliker-Fuse nucleus nTPM: 105.8
2793
Female, age 91, left hemisphere
121.8
2163
Male, age 80, both hemispheres
119.9
2315
Male, age 76, right hemisphere
75.6
Lateral lemniscal nuclei nTPM: 127.0
2453
Male, age 74, right hemisphere
139.5
2169
Male, age 76, both hemispheres
132.3
2320
Female, age 91, left hemisphere
126.3
2746
Female, age 85, left hemisphere
121.8
2036
Male, age 80, both hemispheres
115.2
Lateral parabrachial nucleus nTPM: 112.4
2139
Female, age 85, right hemisphere
136.5
2790
Male, age 61, both hemispheres
125.2
2013
Male, age 80, both hemispheres
112.6
2792
Male, age 76, both hemispheres
75.5
Lateral vestibular nucleus nTPM: 108.9
2311
Male, age 80, both hemispheres
115.5
2184
Male, age 76, both hemispheres
102.2
Locus coeruleus nTPM: 120.2
2162
Male, age 80, both hemispheres
137.6
2720
Male, age 74, both hemispheres
127.8
2123
Female, age 91, both hemispheres
126.3
2317
Female, age 72, unknown
119.9
2014
Male, age 55, unknown
114.7
2788
Male, age 74, unknown
107.9
1980
Male, age 76, both hemispheres
107.5
Medial parabrachial nucleus nTPM: 119.5
2156
Male, age 61, both hemispheres
142.2
2786
Male, age 76, both hemispheres
120.4
2170
Female, age 91, both hemispheres
116.3
2854
Male, age 80, both hemispheres
116.3
2463
Female, age 85, right hemisphere
102.6
Medial periolivary nuclei nTPM: 127.5
2171
Female, age 85, both hemispheres
146.2
2063
Male, age 76, both hemispheres
134.8
2458
Female, age 91, both hemispheres
125.5
2791
Male, age 74, right hemisphere
117.6
2081
Male, age 80, both hemispheres
113.5
Motor facial nucleus nTPM: 124.3
2327
Male, age 80, both hemispheres
136.0
2062
Male, age 76, both hemispheres
135.1
2365
Male, age 74, right hemisphere
131.5
2697
Female, age 85, both hemispheres
121.3
2126
Male, age 61, both hemispheres
119.4
2795
Female, age 91, both hemispheres
102.5
Motor trigeminal nucleus nTPM: 129.6
2335
Male, age 61, both hemispheres
145.2
2560
Male, age 74, both hemispheres
132.4
2321
Female, age 91, both hemispheres
131.3
2079
Male, age 80, both hemispheres
129.4
2309
Male, age 76, both hemispheres
109.8
Nuclei of the trapezoid body nTPM: 131.7
2735
Female, age 85, both hemispheres
143.9
2159
Male, age 61, both hemispheres
140.0
1983
Male, age 76, both hemispheres
133.8
2368
Female, age 91, both hemispheres
122.0
2166
Male, age 80, both hemispheres
119.1
Nucleus raphe magnus nTPM: 135.0
2172
Female, age 85, both hemispheres
163.4
2160
Male, age 61, both hemispheres
153.3
2455
Male, age 74, both hemispheres
141.2
2328
Male, age 80, both hemispheres
123.8
2459
Female, age 91, both hemispheres
115.3
2051
Male, age 76, both hemispheres
113.2
Paramedian reticular nucleus nTPM: 120.3
2050
Female, age 85, both hemispheres
141.5
2313
Male, age 61, both hemispheres
141.3
2057
Male, age 80, both hemispheres
117.3
2052
Male, age 76, both hemispheres
81.1
Pedunculopontine tegmental nucleus nTPM: 121.5
1921
Female, age 85, both hemispheres
136.0
2338
Male, age 61, both hemispheres
121.6
2334
Male, age 80, both hemispheres
106.8
Pontine nuclei nTPM: 128.4
2787
Female, age 85, both hemispheres
166.2
1863
Male, age 55, unknown
133.4
2115
Male, age 80, left hemisphere
132.9
2727
Male, age 61, right hemisphere
122.7
2319
Female, age 91, both hemispheres
120.0
2454
Male, age 74, left hemisphere
119.9
1968
Male, age 76, left hemisphere
119.0
2109
Female, age 72, unknown
112.8
Pontine raphe nucleus nTPM: 138.9
2122
Female, age 85, midline
139.5
2853
Male, age 76, midline
138.2
Posteroventral cochlear nucleus nTPM: 106.8
2752
Female, age 85, both hemispheres
123.4
2371
Male, age 61, both hemispheres
108.4
2070
Male, age 76, both hemispheres
105.5
2135
Female, age 91, both hemispheres
104.4
2341
Male, age 80, both hemispheres
92.2
Principal sensory trigeminal nucleus nTPM: 126.8
2158
Male, age 61, both hemispheres
147.7
2008
Male, age 80, left hemisphere
137.3
2367
Female, age 91, left hemisphere
122.4
2324
Male, age 76, both hemispheres
99.9
Reticular pontine nucleus, caudal nTPM: 118.4
2559
Male, age 74, both hemispheres
129.5
2332
Male, age 80, right hemisphere
126.1
2092
Male, age 76, both hemispheres
113.3
2457
Female, age 91, both hemispheres
104.7
Reticular pontine nucleus, oral nTPM: 120.1
2012
Female, age 85, both hemispheres
130.0
2167
Male, age 76, both hemispheres
127.2
2361
Male, age 74, both hemispheres
115.8
1939
Male, age 80, both hemispheres
114.8
2366
Female, age 91, both hemispheres
112.7
Reticulotegmental nucleus nTPM: 122.7
2325
Male, age 76, both hemispheres
133.0
2452
Male, age 74, both hemispheres
127.7
2333
Male, age 80, both hemispheres
115.3
2322
Female, age 91, both hemispheres
115.0
Spinal trigeminal nucleus, oral nTPM: 117.4
1978
Male, age 76, both hemispheres
122.6
2164
Male, age 80, both hemispheres
114.8
2737
Female, age 85, both hemispheres
114.7
Subcoeruleus area nTPM: 124.3
2323
Female, age 91, left hemisphere
142.4
2089
Male, age 76, left hemisphere
132.6
2451
Male, age 74, both hemispheres
129.7
1958
Male, age 80, both hemispheres
119.5
2369
Female, age 85, left hemisphere
97.4
Superior olive nTPM: 128.7
1875
Female, age 85, both hemispheres
143.3
2561
Female, age 91, both hemispheres
131.5
2364
Male, age 74, right hemisphere
130.0
2020
Male, age 76, both hemispheres
121.7
2329
Male, age 80, right hemisphere
117.2
Ventral periolivary nuclei nTPM: 141.3
2130
Female, age 85, both hemispheres
166.6
2794
Female, age 91, left hemisphere
145.4
2165
Male, age 80, both hemispheres
134.8
2023
Male, age 76, both hemispheres
118.4
Ventrolateral tegmental area, A5 NE cell group nTPM: 121.8
2449
Male, age 74, both hemispheres
145.6
1959
Male, age 76, both hemispheres
128.8
2161
Male, age 80, both hemispheres
115.0
2456
Female, age 91, both hemispheres
114.3
2840
Female, age 85, both hemispheres
113.4
2359
Male, age 61, both hemispheres
113.3
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
106.3
Pig sample
Sample description
nTPM
Pons nTPM: 106.3
Samples: 4
Max nTPM: 157.3
Min nTPM: 83.7
Sample A
Female
157.3
Sample B
Female
83.7
Sample C
Male
95.6
Sample D
Male
88.5
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
