HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:9.2 nTPM
HPA Brain:31.9 nTPM
GTEx:9.2 nTPM
FANTOM5:32.2 Scaled Tags Per Million
Pig:27.3 nTPM
Mouse:7.5 nTPM
Allen mouse:0.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA004926
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 31.9
Sample id Sample description nTPM
Hippocampus
nTPM: 28.0
2621 Female, age 67, right hemisphere 35.4
1898 Male, age 80, left hemisphere 29.0
1855 Male, age 76, left hemisphere 28.6
2148 Female, age 91, left hemisphere 27.8
1911 Female, age 85, right hemisphere 24.6
2529 Female, age 94, left hemisphere 22.6
Dentate gyrus
nTPM: 28.2
2010 Male, age 76, both hemispheres 31.0
1927 Female, age 91, both hemispheres 29.0
2246 Female, age 85, both hemispheres 28.5
2530 Female, age 94, left hemisphere 27.6
2531 Female, age 67, both hemispheres 27.2
2528 Male, age 74, both hemispheres 25.7
Entorhinal gyrus
nTPM: 29.9
2613 Female, age 94, left hemisphere 33.1
2686 Male, age 75, right hemisphere 31.8
1938 Female, age 85, left hemisphere 30.5
2764 Male, age 80, right hemisphere 29.2
1787 Male, age 76, left hemisphere 27.7
2117 Female, age 91, right hemisphere 27.3
Hippocampus, CA1
nTPM: 31.7
2749 Male, age 80, left hemisphere 44.6
2045 Male, age 76, both hemispheres 34.0
2527 Male, age 74, both hemispheres 31.4
1873 Female, age 85, both hemispheres 24.4
2082 Female, age 91, right hemisphere 24.3
Hippocampus, CA2
nTPM: 28.8
1940 Female, age 85, left hemisphere 32.8
1963 Male, age 80, left hemisphere 32.0
1892 Male, age 76, both hemispheres 31.0
2113 Female, age 91, right hemisphere 27.7
2437 Female, age 94, left hemisphere 25.3
2249 Male, age 74, both hemispheres 24.4
Hippocampus, CA3
nTPM: 29.5
2137 Male, age 80, left hemisphere 35.4
1867 Male, age 76, both hemispheres 34.1
2861 Female, age 67, both hemispheres 29.5
2620 Female, age 94, left hemisphere 27.0
2436 Male, age 74, both hemispheres 26.0
1891 Female, age 85, both hemispheres 24.8
Parahippocampal cortex
nTPM: 31.3
2532 Female, age 72, left hemisphere 35.5
2622 Female, age 67, right hemisphere 34.2
1850 Male, age 80, both hemispheres 33.7
2245 Female, age 91, both hemispheres 32.8
2250 Female, age 67, right hemisphere 32.6
2693 Female, age 94, both hemispheres 32.2
2692 Male, age 74, both hemispheres 30.9
1933 Female, age 85, both hemispheres 28.9
1990 Female, age 91, right hemisphere 27.2
2018 Male, age 76, both hemispheres 24.8
Perirhinal gyrus
nTPM: 31.9
1841 Female, age 85, right hemisphere 35.2
2521 Female, age 94, right hemisphere 32.9
1794 Male, age 80, right hemisphere 31.7
2848 Male, age 76, right hemisphere 31.2
1847 Female, age 91, left hemisphere 28.6
Subiculum
nTPM: 29.9
2438 Female, age 94, left hemisphere 33.7
2042 Male, age 76, both hemispheres 31.2
1901 Male, age 80, both hemispheres 30.7
2619 Male, age 74, both hemispheres 30.6
1977 Female, age 85, both hemispheres 29.1
2729 Female, age 91, right hemisphere 24.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 9.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 9.2
Samples: 197

Max nTPM: 28.1
Min nTPM: 4.6
Std nTPM: 2.8
Median nTPM: 8.8
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 28.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 19.9
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 19.7
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 18.3
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 17.6
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 17.3
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 15.3
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 15.1
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 13.9
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 13.0
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 13.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 32.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 32.2
FF:10153-102I9 76 years, female 35.4
FF:10169-103B7 60 years, female 29.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 27.3
Pig sample Sample description nTPM
Subiculum
nTPM: 24.5
Samples: 4

Max nTPM: 26.3
Min nTPM: 23.3
Sample A Female 26.3
Sample B Female 24.0
Sample C Male 24.5
Sample D Male 23.3
Dorsal hippocampus
nTPM: 25.8
Samples: 4

Max nTPM: 29.0
Min nTPM: 21.8
Sample A Female 29.0
Sample B Female 27.9
Sample C Male 24.5
Sample D Male 21.8
Entorhinal cortex
nTPM: 23.9
Samples: 4

Max nTPM: 27.0
Min nTPM: 21.5
Sample A Female 24.4
Sample B Female 22.6
Sample C Male 27.0
Sample D Male 21.5
Ventral hippocampus
nTPM: 27.3
Samples: 4

Max nTPM: 29.1
Min nTPM: 23.3
Sample A Female 29.1
Sample B Female 23.3
Sample C Male 28.4
Sample D Male 28.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 7.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 7.4
Samples: 4

Max nTPM: 7.8
Min nTPM: 6.7
Sample A Male 7.8
Sample B Male 7.3
Sample C Female 6.7
Sample D Female 7.7
Hippocampal formation
nTPM: 7.5
Samples: 4

Max nTPM: 9.5
Min nTPM: 6.1
Sample A Male 6.3
Sample B Male 9.5
Sample C Female 8.0
Sample D Female 6.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
74958463 Antisense, RP_060315_05_B01, Mouse strain C57BL/6J (56 days, male) 0.6
70201594 Antisense, RP_050517_04_G08, Mouse strain C57BL/6J (56 days, male) 0.5

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