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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
210.1
nTPM
FANTOM5:
210.6
Scaled Tags Per Million
Pig:
89.7
nTPM
PONS - Annotated protein expression
Pending normal tissue analysis
PONS - HPA Brain RNA-seq
Max nTPM
210.1
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 176.5
2188
Female, age 91, both hemispheres
228.1
2090
Male, age 80, both hemispheres
208.3
1984
Male, age 76, both hemispheres
154.5
2301
Female, age 85, both hemispheres
115.1
Dorsal cochlear nucleus nTPM: 190.6
2802
Male, age 74, right hemisphere
247.9
2187
Female, age 91, both hemispheres
210.7
2370
Male, age 61, both hemispheres
179.7
2378
Male, age 80, both hemispheres
161.3
2058
Male, age 76, both hemispheres
153.2
Dorsal tegmental nucleus nTPM: 188.7
2083
Male, age 80, both hemispheres
250.2
2326
Male, age 74, both hemispheres
213.4
1936
Male, age 76, left hemisphere
157.5
2358
Male, age 61, both hemispheres
133.6
Dorsolateral tegmental area nTPM: 194.7
2654
Male, age 80, both hemispheres
259.0
2751
Female, age 85, both hemispheres
219.6
2360
Male, age 74, both hemispheres
173.0
2141
Male, age 76, both hemispheres
162.0
2337
Male, age 61, both hemispheres
159.5
Kolliker-Fuse nucleus nTPM: 188.6
2315
Male, age 76, right hemisphere
212.3
2793
Female, age 91, left hemisphere
183.5
2163
Male, age 80, both hemispheres
170.0
Lateral lemniscal nuclei nTPM: 142.2
2169
Male, age 76, both hemispheres
159.5
2453
Male, age 74, right hemisphere
153.7
2746
Female, age 85, left hemisphere
145.4
2320
Female, age 91, left hemisphere
129.0
2036
Male, age 80, both hemispheres
123.5
Lateral parabrachial nucleus nTPM: 194.1
2792
Male, age 76, both hemispheres
216.6
2013
Male, age 80, both hemispheres
199.9
2139
Female, age 85, right hemisphere
197.7
2790
Male, age 61, both hemispheres
162.1
Lateral vestibular nucleus nTPM: 161.0
2311
Male, age 80, both hemispheres
172.6
2184
Male, age 76, both hemispheres
149.4
Locus coeruleus nTPM: 174.5
2123
Female, age 91, both hemispheres
201.4
2014
Male, age 55, unknown
199.3
2720
Male, age 74, both hemispheres
179.4
2788
Male, age 74, unknown
169.1
2317
Female, age 72, unknown
169.0
2162
Male, age 80, both hemispheres
157.8
1980
Male, age 76, both hemispheres
145.4
Medial parabrachial nucleus nTPM: 190.4
2170
Female, age 91, both hemispheres
260.0
2463
Female, age 85, right hemisphere
213.5
2854
Male, age 80, both hemispheres
163.9
2786
Male, age 76, both hemispheres
157.4
2156
Male, age 61, both hemispheres
157.2
Medial periolivary nuclei nTPM: 162.9
2063
Male, age 76, both hemispheres
199.0
2791
Male, age 74, right hemisphere
186.8
2081
Male, age 80, both hemispheres
155.6
2458
Female, age 91, both hemispheres
138.1
2171
Female, age 85, both hemispheres
135.2
Motor facial nucleus nTPM: 157.4
2126
Male, age 61, both hemispheres
189.5
2062
Male, age 76, both hemispheres
183.6
2795
Female, age 91, both hemispheres
167.3
2365
Male, age 74, right hemisphere
166.2
2697
Female, age 85, both hemispheres
136.5
2327
Male, age 80, both hemispheres
101.1
Motor trigeminal nucleus nTPM: 170.2
2309
Male, age 76, both hemispheres
195.4
2335
Male, age 61, both hemispheres
183.5
2560
Male, age 74, both hemispheres
173.1
2079
Male, age 80, both hemispheres
155.3
2321
Female, age 91, both hemispheres
143.5
Nuclei of the trapezoid body nTPM: 156.1
1983
Male, age 76, both hemispheres
199.9
2159
Male, age 61, both hemispheres
153.0
2735
Female, age 85, both hemispheres
148.7
2166
Male, age 80, both hemispheres
147.4
2368
Female, age 91, both hemispheres
131.7
Nucleus raphe magnus nTPM: 143.1
2160
Male, age 61, both hemispheres
169.3
2051
Male, age 76, both hemispheres
145.7
2455
Male, age 74, both hemispheres
145.6
2172
Female, age 85, both hemispheres
136.1
2459
Female, age 91, both hemispheres
135.0
2328
Male, age 80, both hemispheres
126.8
Paramedian reticular nucleus nTPM: 185.4
2050
Female, age 85, both hemispheres
198.9
2057
Male, age 80, both hemispheres
195.8
2052
Male, age 76, both hemispheres
185.3
2313
Male, age 61, both hemispheres
161.5
Pedunculopontine tegmental nucleus nTPM: 182.6
2334
Male, age 80, both hemispheres
185.6
2338
Male, age 61, both hemispheres
183.2
1921
Female, age 85, both hemispheres
178.9
Pontine nuclei nTPM: 175.8
1863
Male, age 55, unknown
212.4
2319
Female, age 91, both hemispheres
183.4
2787
Female, age 85, both hemispheres
178.8
1968
Male, age 76, left hemisphere
175.3
2454
Male, age 74, left hemisphere
171.5
2109
Female, age 72, unknown
171.3
2727
Male, age 61, right hemisphere
169.6
2115
Male, age 80, left hemisphere
143.9
Pontine raphe nucleus nTPM: 179.6
2853
Male, age 76, midline
183.3
2122
Female, age 85, midline
175.9
Posteroventral cochlear nucleus nTPM: 210.1
2135
Female, age 91, both hemispheres
260.1
2341
Male, age 80, both hemispheres
229.5
2070
Male, age 76, both hemispheres
193.2
2371
Male, age 61, both hemispheres
185.9
2752
Female, age 85, both hemispheres
181.8
Principal sensory trigeminal nucleus nTPM: 155.2
2158
Male, age 61, both hemispheres
197.2
2367
Female, age 91, left hemisphere
150.7
2008
Male, age 80, left hemisphere
144.7
2324
Male, age 76, both hemispheres
128.2
Reticular pontine nucleus, caudal nTPM: 181.3
2559
Male, age 74, both hemispheres
233.8
2092
Male, age 76, both hemispheres
200.8
2457
Female, age 91, both hemispheres
176.0
2332
Male, age 80, right hemisphere
114.5
Reticular pontine nucleus, oral nTPM: 187.6
1939
Male, age 80, both hemispheres
216.9
2366
Female, age 91, both hemispheres
196.9
2167
Male, age 76, both hemispheres
179.9
2361
Male, age 74, both hemispheres
173.4
2012
Female, age 85, both hemispheres
170.7
Reticulotegmental nucleus nTPM: 166.9
2452
Male, age 74, both hemispheres
206.1
2322
Female, age 91, both hemispheres
160.2
2325
Male, age 76, both hemispheres
158.3
2333
Male, age 80, both hemispheres
142.8
Spinal trigeminal nucleus, oral nTPM: 156.3
2737
Female, age 85, both hemispheres
167.7
2164
Male, age 80, both hemispheres
150.8
1978
Male, age 76, both hemispheres
150.5
Subcoeruleus area nTPM: 184.8
2451
Male, age 74, both hemispheres
221.9
2369
Female, age 85, left hemisphere
221.3
1958
Male, age 80, both hemispheres
185.5
2323
Female, age 91, left hemisphere
152.2
2089
Male, age 76, left hemisphere
143.2
Superior olive nTPM: 160.9
2020
Male, age 76, both hemispheres
208.9
1875
Female, age 85, both hemispheres
170.3
2364
Male, age 74, right hemisphere
163.4
2561
Female, age 91, both hemispheres
149.5
2329
Male, age 80, right hemisphere
112.2
Ventral periolivary nuclei nTPM: 166.1
2023
Male, age 76, both hemispheres
216.0
2794
Female, age 91, left hemisphere
171.5
2165
Male, age 80, both hemispheres
163.9
2130
Female, age 85, both hemispheres
113.0
Ventrolateral tegmental area, A5 NE cell group nTPM: 145.8
2359
Male, age 61, both hemispheres
157.9
2449
Male, age 74, both hemispheres
147.9
1959
Male, age 76, both hemispheres
146.6
2840
Female, age 85, both hemispheres
145.0
2456
Female, age 91, both hemispheres
141.4
2161
Male, age 80, both hemispheres
135.9
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
