HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni
Consensus:35.3 nTPM
HPA Brain:71.6 nTPM
GTEx:35.3 nTPM
FANTOM5:9.2 Scaled Tags Per Million
Pig:157.1 nTPM
Mouse:131.0 nTPM
Allen mouse:2.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA034489Antibody HPA034490
Glial cells Not detectedLow
Neuronal cells LowNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 71.6
Sample id Sample description nTPM
Hippocampus
nTPM: 59.7
2148 Female, age 91, left hemisphere 68.2
1898 Male, age 80, left hemisphere 67.1
2621 Female, age 67, right hemisphere 65.9
2529 Female, age 94, left hemisphere 58.8
1855 Male, age 76, left hemisphere 50.5
1911 Female, age 85, right hemisphere 47.6
Dentate gyrus
nTPM: 62.0
1927 Female, age 91, both hemispheres 69.4
2530 Female, age 94, left hemisphere 68.7
2531 Female, age 67, both hemispheres 67.1
2528 Male, age 74, both hemispheres 57.5
2010 Male, age 76, both hemispheres 55.4
2246 Female, age 85, both hemispheres 53.7
Entorhinal gyrus
nTPM: 69.0
2613 Female, age 94, left hemisphere 83.6
2686 Male, age 75, right hemisphere 71.0
2764 Male, age 80, right hemisphere 68.9
1938 Female, age 85, left hemisphere 67.3
1787 Male, age 76, left hemisphere 67.2
2117 Female, age 91, right hemisphere 55.8
Hippocampus, CA1
nTPM: 59.6
2749 Male, age 80, left hemisphere 71.7
1873 Female, age 85, both hemispheres 57.6
2527 Male, age 74, both hemispheres 57.6
2045 Male, age 76, both hemispheres 56.4
2082 Female, age 91, right hemisphere 54.7
Hippocampus, CA2
nTPM: 63.7
1963 Male, age 80, left hemisphere 87.4
2437 Female, age 94, left hemisphere 65.5
1892 Male, age 76, both hemispheres 64.0
1940 Female, age 85, left hemisphere 58.5
2113 Female, age 91, right hemisphere 57.2
2249 Male, age 74, both hemispheres 49.7
Hippocampus, CA3
nTPM: 64.3
2861 Female, age 67, both hemispheres 77.1
2620 Female, age 94, left hemisphere 71.2
2137 Male, age 80, left hemisphere 69.7
1867 Male, age 76, both hemispheres 58.0
1891 Female, age 85, both hemispheres 55.5
2436 Male, age 74, both hemispheres 54.3
Parahippocampal cortex
nTPM: 65.0
1850 Male, age 80, both hemispheres 74.7
2622 Female, age 67, right hemisphere 69.3
1990 Female, age 91, right hemisphere 68.4
2245 Female, age 91, both hemispheres 67.9
2692 Male, age 74, both hemispheres 66.6
2693 Female, age 94, both hemispheres 64.5
2250 Female, age 67, right hemisphere 63.0
2532 Female, age 72, left hemisphere 61.8
1933 Female, age 85, both hemispheres 59.0
2018 Male, age 76, both hemispheres 54.7
Perirhinal gyrus
nTPM: 71.6
1847 Female, age 91, left hemisphere 80.4
1794 Male, age 80, right hemisphere 78.8
2521 Female, age 94, right hemisphere 75.5
1841 Female, age 85, right hemisphere 65.8
2848 Male, age 76, right hemisphere 57.5
Subiculum
nTPM: 54.7
2619 Male, age 74, both hemispheres 62.1
2438 Female, age 94, left hemisphere 60.7
1977 Female, age 85, both hemispheres 57.8
1901 Male, age 80, both hemispheres 51.9
2729 Female, age 91, right hemisphere 51.9
2042 Male, age 76, both hemispheres 43.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 35.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 35.3
Samples: 197

Max nTPM: 101.9
Min nTPM: 16.9
Std nTPM: 12.8
Median nTPM: 32.3
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 101.9
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 77.6
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 75.8
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 74.1
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 66.6
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 65.8
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 63.3
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 60.9
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 59.2
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 58.8
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 58.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 9.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 9.2
FF:10153-102I9 76 years, female 12.2
FF:10169-103B7 60 years, female 6.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 157.1
Pig sample Sample description nTPM
Subiculum
nTPM: 109.7
Samples: 4

Max nTPM: 142.8
Min nTPM: 92.9
Sample A Female 142.8
Sample B Female 107.3
Sample C Male 95.7
Sample D Male 92.9
Dorsal hippocampus
nTPM: 103.1
Samples: 4

Max nTPM: 120.5
Min nTPM: 71.3
Sample A Female 120.5
Sample B Female 105.4
Sample C Male 115.1
Sample D Male 71.3
Entorhinal cortex
nTPM: 157.1
Samples: 4

Max nTPM: 185.7
Min nTPM: 136.2
Sample A Female 139.6
Sample B Female 185.7
Sample C Male 166.7
Sample D Male 136.2
Ventral hippocampus
nTPM: 96.8
Samples: 4

Max nTPM: 110.3
Min nTPM: 82.5
Sample A Female 88.4
Sample B Female 82.5
Sample C Male 110.3
Sample D Male 106.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 131.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 131.0
Samples: 4

Max nTPM: 135.1
Min nTPM: 125.3
Sample A Male 135.1
Sample B Male 132.4
Sample C Female 125.3
Sample D Female 131.0
Hippocampal formation
nTPM: 121.9
Samples: 4

Max nTPM: 134.7
Min nTPM: 112.0
Sample A Male 120.1
Sample B Male 120.6
Sample C Female 134.7
Sample D Female 112.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.7
71213216 Antisense, RP_050816_04_A10, Mouse strain C57BL/6J (56 days, male) 3.7
71496387 Antisense, RP_050913_04_D09, Mouse strain C57BL/6J (56 days, male) 1.6

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