HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:44.6 nTPM
HPA Brain:31.4 nTPM
GTEx:44.6 nTPM
FANTOM5:29.2 Scaled Tags Per Million
Pig:14.9 nTPM
Mouse:34.5 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA036122Antibody HPA036123
Glial cells Not detectedNot detected
Neuronal cells LowMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 31.4
Sample id Sample description nTPM
Hippocampus
nTPM: 26.3
1898 Male, age 80, left hemisphere 38.3
1855 Male, age 76, left hemisphere 26.1
2529 Female, age 94, left hemisphere 24.8
1911 Female, age 85, right hemisphere 23.9
2621 Female, age 67, right hemisphere 22.8
2148 Female, age 91, left hemisphere 22.1
Dentate gyrus
nTPM: 27.6
2010 Male, age 76, both hemispheres 34.7
2530 Female, age 94, left hemisphere 32.9
1927 Female, age 91, both hemispheres 32.4
2528 Male, age 74, both hemispheres 24.2
2246 Female, age 85, both hemispheres 20.7
2531 Female, age 67, both hemispheres 20.6
Entorhinal gyrus
nTPM: 26.2
2764 Male, age 80, right hemisphere 32.7
1938 Female, age 85, left hemisphere 31.5
1787 Male, age 76, left hemisphere 26.1
2613 Female, age 94, left hemisphere 24.6
2117 Female, age 91, right hemisphere 22.2
2686 Male, age 75, right hemisphere 20.3
Hippocampus, CA1
nTPM: 31.4
2749 Male, age 80, left hemisphere 54.8
1873 Female, age 85, both hemispheres 32.0
2045 Male, age 76, both hemispheres 29.6
2527 Male, age 74, both hemispheres 21.9
2082 Female, age 91, right hemisphere 18.5
Hippocampus, CA2
nTPM: 29.0
1963 Male, age 80, left hemisphere 43.4
1892 Male, age 76, both hemispheres 38.6
2437 Female, age 94, left hemisphere 28.3
1940 Female, age 85, left hemisphere 22.5
2249 Male, age 74, both hemispheres 22.4
2113 Female, age 91, right hemisphere 19.0
Hippocampus, CA3
nTPM: 27.1
2137 Male, age 80, left hemisphere 34.0
1867 Male, age 76, both hemispheres 33.3
2620 Female, age 94, left hemisphere 27.5
2861 Female, age 67, both hemispheres 24.0
1891 Female, age 85, both hemispheres 23.2
2436 Male, age 74, both hemispheres 20.7
Parahippocampal cortex
nTPM: 23.0
1850 Male, age 80, both hemispheres 30.1
2018 Male, age 76, both hemispheres 28.3
1990 Female, age 91, right hemisphere 27.2
1933 Female, age 85, both hemispheres 26.7
2250 Female, age 67, right hemisphere 23.7
2245 Female, age 91, both hemispheres 21.0
2693 Female, age 94, both hemispheres 20.0
2692 Male, age 74, both hemispheres 18.4
2532 Female, age 72, left hemisphere 18.3
2622 Female, age 67, right hemisphere 16.5
Perirhinal gyrus
nTPM: 28.5
1794 Male, age 80, right hemisphere 35.1
1847 Female, age 91, left hemisphere 34.0
1841 Female, age 85, right hemisphere 28.7
2521 Female, age 94, right hemisphere 24.1
2848 Male, age 76, right hemisphere 20.6
Subiculum
nTPM: 24.3
1901 Male, age 80, both hemispheres 32.6
1977 Female, age 85, both hemispheres 30.6
2042 Male, age 76, both hemispheres 24.3
2619 Male, age 74, both hemispheres 21.8
2729 Female, age 91, right hemisphere 19.0
2438 Female, age 94, left hemisphere 17.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 44.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 44.6
Samples: 197

Max nTPM: 107.8
Min nTPM: 12.6
Std nTPM: 16.7
Median nTPM: 41.8
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 107.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 101.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 96.4
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 95.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 91.3
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 87.3
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 84.3
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 82.8
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 82.4
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 80.4
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 79.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 29.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 29.2
FF:10169-103B7 60 years, female 37.3
FF:10153-102I9 76 years, female 21.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 14.9
Pig sample Sample description nTPM
Subiculum
nTPM: 11.6
Samples: 4

Max nTPM: 14.1
Min nTPM: 10.1
Sample A Female 14.1
Sample B Female 10.4
Sample C Male 10.1
Sample D Male 11.7
Dorsal hippocampus
nTPM: 14.9
Samples: 4

Max nTPM: 19.1
Min nTPM: 11.1
Sample A Female 19.1
Sample B Female 14.8
Sample C Male 14.5
Sample D Male 11.1
Entorhinal cortex
nTPM: 13.3
Samples: 4

Max nTPM: 16.5
Min nTPM: 11.6
Sample A Female 11.6
Sample B Female 13.4
Sample C Male 16.5
Sample D Male 11.6
Ventral hippocampus
nTPM: 12.5
Samples: 4

Max nTPM: 15.5
Min nTPM: 9.6
Sample A Female 11.6
Sample B Female 9.6
Sample C Male 15.5
Sample D Male 13.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 34.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 32.0
Samples: 4

Max nTPM: 37.8
Min nTPM: 27.5
Sample A Male 29.8
Sample B Male 33.0
Sample C Female 37.8
Sample D Female 27.5
Hippocampal formation
nTPM: 34.6
Samples: 4

Max nTPM: 37.7
Min nTPM: 31.0
Sample A Male 35.5
Sample B Male 31.0
Sample C Female 34.0
Sample D Female 37.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
68444696 Antisense, RP_050111_02_C12, Mouse strain C57BL/6J (56 days, male) 0.0
70918808 Antisense, RP_050712_04_E09, Mouse strain C57BL/6J (56 days, male) 0.0

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