HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Not detected
RNA expressioni
Consensus:132.0 nTPM
HPA Brain:128.3 nTPM
GTEx:132.0 nTPM
FANTOM5:176.2 Scaled Tags Per Million
Pig:287.8 nTPM
Mouse:38.0 nTPM
Allen mouse:2.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA014372
Glial cells High
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 128.3
Sample id Sample description nTPM
Hippocampus
nTPM: 87.1
2529 Female, age 94, left hemisphere 109.6
1911 Female, age 85, right hemisphere 105.9
1855 Male, age 76, left hemisphere 87.7
2621 Female, age 67, right hemisphere 74.8
1898 Male, age 80, left hemisphere 72.7
2148 Female, age 91, left hemisphere 71.6
Dentate gyrus
nTPM: 73.3
2010 Male, age 76, both hemispheres 88.1
2530 Female, age 94, left hemisphere 83.4
2528 Male, age 74, both hemispheres 78.5
2246 Female, age 85, both hemispheres 67.5
2531 Female, age 67, both hemispheres 66.5
1927 Female, age 91, both hemispheres 55.6
Entorhinal gyrus
nTPM: 109.2
2117 Female, age 91, right hemisphere 195.0
2764 Male, age 80, right hemisphere 129.3
2686 Male, age 75, right hemisphere 96.2
2613 Female, age 94, left hemisphere 87.6
1938 Female, age 85, left hemisphere 87.5
1787 Male, age 76, left hemisphere 59.7
Hippocampus, CA1
nTPM: 69.2
2527 Male, age 74, both hemispheres 101.9
2082 Female, age 91, right hemisphere 87.3
1873 Female, age 85, both hemispheres 79.9
2749 Male, age 80, left hemisphere 55.8
2045 Male, age 76, both hemispheres 21.4
Hippocampus, CA2
nTPM: 80.7
1963 Male, age 80, left hemisphere 129.6
2249 Male, age 74, both hemispheres 98.5
2113 Female, age 91, right hemisphere 98.3
2437 Female, age 94, left hemisphere 78.3
1940 Female, age 85, left hemisphere 47.0
1892 Male, age 76, both hemispheres 32.5
Hippocampus, CA3
nTPM: 60.3
1891 Female, age 85, both hemispheres 145.9
1867 Male, age 76, both hemispheres 65.5
2436 Male, age 74, both hemispheres 58.3
2861 Female, age 67, both hemispheres 34.2
2137 Male, age 80, left hemisphere 32.5
2620 Female, age 94, left hemisphere 25.3
Parahippocampal cortex
nTPM: 79.9
1990 Female, age 91, right hemisphere 127.5
2692 Male, age 74, both hemispheres 125.5
1850 Male, age 80, both hemispheres 95.1
2532 Female, age 72, left hemisphere 92.6
1933 Female, age 85, both hemispheres 76.8
2245 Female, age 91, both hemispheres 71.2
2018 Male, age 76, both hemispheres 66.5
2693 Female, age 94, both hemispheres 59.9
2250 Female, age 67, right hemisphere 42.8
2622 Female, age 67, right hemisphere 41.4
Perirhinal gyrus
nTPM: 49.8
1847 Female, age 91, left hemisphere 62.6
2521 Female, age 94, right hemisphere 51.4
1794 Male, age 80, right hemisphere 50.9
2848 Male, age 76, right hemisphere 45.2
1841 Female, age 85, right hemisphere 38.7
Subiculum
nTPM: 128.3
2438 Female, age 94, left hemisphere 157.9
1901 Male, age 80, both hemispheres 153.7
2042 Male, age 76, both hemispheres 144.6
1977 Female, age 85, both hemispheres 131.1
2619 Male, age 74, both hemispheres 97.2
2729 Female, age 91, right hemisphere 85.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 132.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 132.0
Samples: 197

Max nTPM: 578.7
Min nTPM: 6.9
Std nTPM: 87.2
Median nTPM: 109.8
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 578.7
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 476.5
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 448.8
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 420.5
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 395.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 340.9
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 325.1
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 301.3
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 292.6
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 278.9
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 273.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 176.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 176.2
FF:10153-102I9 76 years, female 201.8
FF:10169-103B7 60 years, female 150.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 287.8
Pig sample Sample description nTPM
Subiculum
nTPM: 101.1
Samples: 4

Max nTPM: 127.8
Min nTPM: 77.9
Sample A Female 116.4
Sample B Female 127.8
Sample C Male 77.9
Sample D Male 82.4
Dorsal hippocampus
nTPM: 287.8
Samples: 4

Max nTPM: 440.4
Min nTPM: 79.5
Sample A Female 440.4
Sample B Female 206.2
Sample C Male 425.1
Sample D Male 79.5
Entorhinal cortex
nTPM: 95.6
Samples: 4

Max nTPM: 153.3
Min nTPM: 58.6
Sample A Female 58.6
Sample B Female 153.3
Sample C Male 61.2
Sample D Male 109.1
Ventral hippocampus
nTPM: 164.9
Samples: 4

Max nTPM: 233.2
Min nTPM: 94.7
Sample A Female 185.5
Sample B Female 94.7
Sample C Male 146.2
Sample D Male 233.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 38.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 17.1
Samples: 4

Max nTPM: 27.4
Min nTPM: 4.6
Sample A Male 27.4
Sample B Male 20.3
Sample C Female 16.1
Sample D Female 4.6
Hippocampal formation
nTPM: 38.0
Samples: 4

Max nTPM: 50.3
Min nTPM: 31.0
Sample A Male 31.0
Sample B Male 34.8
Sample C Female 50.3
Sample D Female 35.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.2
69116504 Antisense, RP_050317_02_G03, Mouse strain C57BL/6J (56 days, male) 2.2

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