HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:18.7 nTPM
HPA Brain:43.8 nTPM
GTEx:18.7 nTPM
FANTOM5:140.7 Scaled Tags Per Million
Pig:34.4 nTPM
Mouse:3.8 nTPM
Allen mouse:0.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA044492
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 43.8
Sample id Sample description nTPM
Hippocampus
nTPM: 40.7
1898 Male, age 80, left hemisphere 52.4
1855 Male, age 76, left hemisphere 42.5
2529 Female, age 94, left hemisphere 39.4
1911 Female, age 85, right hemisphere 39.2
2621 Female, age 67, right hemisphere 37.0
2148 Female, age 91, left hemisphere 34.0
Dentate gyrus
nTPM: 41.6
2530 Female, age 94, left hemisphere 51.9
2010 Male, age 76, both hemispheres 48.8
1927 Female, age 91, both hemispheres 46.7
2246 Female, age 85, both hemispheres 36.8
2528 Male, age 74, both hemispheres 34.9
2531 Female, age 67, both hemispheres 30.7
Entorhinal gyrus
nTPM: 37.9
2686 Male, age 75, right hemisphere 42.9
1938 Female, age 85, left hemisphere 41.9
2117 Female, age 91, right hemisphere 41.2
1787 Male, age 76, left hemisphere 35.1
2764 Male, age 80, right hemisphere 33.3
2613 Female, age 94, left hemisphere 33.2
Hippocampus, CA1
nTPM: 40.5
2749 Male, age 80, left hemisphere 56.5
1873 Female, age 85, both hemispheres 46.6
2527 Male, age 74, both hemispheres 39.6
2045 Male, age 76, both hemispheres 31.2
2082 Female, age 91, right hemisphere 28.5
Hippocampus, CA2
nTPM: 43.8
1963 Male, age 80, left hemisphere 61.3
1892 Male, age 76, both hemispheres 50.7
2249 Male, age 74, both hemispheres 38.9
2437 Female, age 94, left hemisphere 38.3
2113 Female, age 91, right hemisphere 37.4
1940 Female, age 85, left hemisphere 36.4
Hippocampus, CA3
nTPM: 38.6
2137 Male, age 80, left hemisphere 50.3
1867 Male, age 76, both hemispheres 47.1
1891 Female, age 85, both hemispheres 41.8
2436 Male, age 74, both hemispheres 36.4
2861 Female, age 67, both hemispheres 30.9
2620 Female, age 94, left hemisphere 25.2
Parahippocampal cortex
nTPM: 37.8
1850 Male, age 80, both hemispheres 42.3
1933 Female, age 85, both hemispheres 40.6
1990 Female, age 91, right hemisphere 40.0
2245 Female, age 91, both hemispheres 39.5
2018 Male, age 76, both hemispheres 39.0
2532 Female, age 72, left hemisphere 38.0
2692 Male, age 74, both hemispheres 37.8
2250 Female, age 67, right hemisphere 35.3
2693 Female, age 94, both hemispheres 35.3
2622 Female, age 67, right hemisphere 29.9
Perirhinal gyrus
nTPM: 36.2
1841 Female, age 85, right hemisphere 42.2
1847 Female, age 91, left hemisphere 37.0
2848 Male, age 76, right hemisphere 35.3
1794 Male, age 80, right hemisphere 33.6
2521 Female, age 94, right hemisphere 33.0
Subiculum
nTPM: 38.1
1901 Male, age 80, both hemispheres 42.6
2042 Male, age 76, both hemispheres 42.6
1977 Female, age 85, both hemispheres 39.2
2729 Female, age 91, right hemisphere 36.8
2438 Female, age 94, left hemisphere 35.7
2619 Male, age 74, both hemispheres 31.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 18.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 18.7
Samples: 197

Max nTPM: 38.5
Min nTPM: 6.2
Std nTPM: 6.1
Median nTPM: 18.2
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 38.5
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 37.7
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 35.5
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 34.1
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 33.3
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 33.0
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 30.4
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 30.3
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 30.2
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 29.9
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 29.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 140.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 140.7
FF:10169-103B7 60 years, female 156.8
FF:10153-102I9 76 years, female 124.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 34.4
Pig sample Sample description nTPM
Subiculum
nTPM: 31.9
Samples: 4

Max nTPM: 38.8
Min nTPM: 28.1
Sample A Female 38.8
Sample B Female 28.8
Sample C Male 28.1
Sample D Male 31.7
Dorsal hippocampus
nTPM: 32.3
Samples: 4

Max nTPM: 37.3
Min nTPM: 29.5
Sample A Female 37.3
Sample B Female 31.7
Sample C Male 30.7
Sample D Male 29.5
Entorhinal cortex
nTPM: 34.4
Samples: 4

Max nTPM: 41.0
Min nTPM: 31.4
Sample A Female 31.7
Sample B Female 41.0
Sample C Male 33.6
Sample D Male 31.4
Ventral hippocampus
nTPM: 30.0
Samples: 4

Max nTPM: 31.1
Min nTPM: 28.0
Sample A Female 31.1
Sample B Female 28.0
Sample C Male 30.1
Sample D Male 30.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 3.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 3.4
Samples: 4

Max nTPM: 3.7
Min nTPM: 3.0
Sample A Male 3.0
Sample B Male 3.7
Sample C Female 3.2
Sample D Female 3.5
Hippocampal formation
nTPM: 3.8
Samples: 4

Max nTPM: 4.4
Min nTPM: 3.2
Sample A Male 4.4
Sample B Male 3.3
Sample C Female 4.3
Sample D Female 3.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.9
2655 Antisense, RP_040507_02_F03, Mouse strain C57BL/6J (56 days, male) 0.9
2656 Antisense, RP_040507_02_F03, Mouse strain C57BL/6J (56 days, male) 0.8

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