HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:17.7 nTPM
HPA Brain:55.4 nTPM
GTEx:17.7 nTPM
FANTOM5:60.8 Scaled Tags Per Million
Pig:28.7 nTPM
Mouse:8.6 nTPM
Allen mouse:1.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA025023Antibody HPA049655
Glial cells Not detectedNot detected
Neuronal cells LowNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 55.4
Sample id Sample description nTPM
Hippocampus
nTPM: 46.2
2529 Female, age 94, left hemisphere 56.7
1911 Female, age 85, right hemisphere 51.3
2621 Female, age 67, right hemisphere 46.4
2148 Female, age 91, left hemisphere 42.6
1855 Male, age 76, left hemisphere 40.2
1898 Male, age 80, left hemisphere 39.6
Dentate gyrus
nTPM: 49.4
2530 Female, age 94, left hemisphere 80.9
2010 Male, age 76, both hemispheres 57.4
2528 Male, age 74, both hemispheres 42.9
2246 Female, age 85, both hemispheres 42.0
2531 Female, age 67, both hemispheres 40.4
1927 Female, age 91, both hemispheres 32.6
Entorhinal gyrus
nTPM: 47.0
2117 Female, age 91, right hemisphere 73.3
2764 Male, age 80, right hemisphere 58.5
2686 Male, age 75, right hemisphere 45.5
2613 Female, age 94, left hemisphere 35.9
1787 Male, age 76, left hemisphere 34.4
1938 Female, age 85, left hemisphere 34.4
Hippocampus, CA1
nTPM: 41.3
2749 Male, age 80, left hemisphere 45.4
1873 Female, age 85, both hemispheres 44.3
2527 Male, age 74, both hemispheres 43.6
2082 Female, age 91, right hemisphere 40.2
2045 Male, age 76, both hemispheres 32.9
Hippocampus, CA2
nTPM: 46.5
1963 Male, age 80, left hemisphere 64.5
2249 Male, age 74, both hemispheres 48.3
2437 Female, age 94, left hemisphere 45.3
2113 Female, age 91, right hemisphere 43.4
1940 Female, age 85, left hemisphere 43.0
1892 Male, age 76, both hemispheres 34.5
Hippocampus, CA3
nTPM: 39.2
1891 Female, age 85, both hemispheres 50.5
1867 Male, age 76, both hemispheres 42.8
2620 Female, age 94, left hemisphere 36.5
2861 Female, age 67, both hemispheres 36.1
2137 Male, age 80, left hemisphere 34.8
2436 Male, age 74, both hemispheres 34.7
Parahippocampal cortex
nTPM: 36.4
2692 Male, age 74, both hemispheres 50.7
2532 Female, age 72, left hemisphere 45.9
1990 Female, age 91, right hemisphere 41.3
2245 Female, age 91, both hemispheres 38.4
2018 Male, age 76, both hemispheres 37.3
1850 Male, age 80, both hemispheres 34.0
1933 Female, age 85, both hemispheres 33.5
2622 Female, age 67, right hemisphere 29.7
2693 Female, age 94, both hemispheres 27.3
2250 Female, age 67, right hemisphere 26.2
Perirhinal gyrus
nTPM: 24.3
2521 Female, age 94, right hemisphere 27.2
1794 Male, age 80, right hemisphere 26.8
2848 Male, age 76, right hemisphere 24.9
1847 Female, age 91, left hemisphere 22.6
1841 Female, age 85, right hemisphere 20.0
Subiculum
nTPM: 55.4
2042 Male, age 76, both hemispheres 72.1
1901 Male, age 80, both hemispheres 67.7
2438 Female, age 94, left hemisphere 52.3
1977 Female, age 85, both hemispheres 48.9
2619 Male, age 74, both hemispheres 47.9
2729 Female, age 91, right hemisphere 43.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 17.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 17.7
Samples: 197

Max nTPM: 58.9
Min nTPM: 3.3
Std nTPM: 8.9
Median nTPM: 15.8
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 58.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 50.0
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 45.3
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 43.3
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 41.6
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 38.2
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 37.8
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 36.9
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 35.9
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 34.9
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 33.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 60.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 60.8
FF:10153-102I9 76 years, female 74.0
FF:10169-103B7 60 years, female 47.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 28.7
Pig sample Sample description nTPM
Subiculum
nTPM: 20.5
Samples: 4

Max nTPM: 22.9
Min nTPM: 19.0
Sample A Female 19.0
Sample B Female 22.9
Sample C Male 20.1
Sample D Male 19.8
Dorsal hippocampus
nTPM: 28.7
Samples: 4

Max nTPM: 39.9
Min nTPM: 15.7
Sample A Female 34.4
Sample B Female 24.8
Sample C Male 39.9
Sample D Male 15.7
Entorhinal cortex
nTPM: 17.4
Samples: 4

Max nTPM: 20.7
Min nTPM: 14.9
Sample A Female 14.9
Sample B Female 20.7
Sample C Male 15.5
Sample D Male 18.4
Ventral hippocampus
nTPM: 24.1
Samples: 4

Max nTPM: 28.0
Min nTPM: 19.5
Sample A Female 24.2
Sample B Female 19.5
Sample C Male 24.6
Sample D Male 28.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 8.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 6.2
Samples: 4

Max nTPM: 8.4
Min nTPM: 3.9
Sample A Male 8.4
Sample B Male 6.6
Sample C Female 5.7
Sample D Female 3.9
Hippocampal formation
nTPM: 8.7
Samples: 4

Max nTPM: 11.4
Min nTPM: 6.7
Sample A Male 6.7
Sample B Male 9.1
Sample C Female 11.4
Sample D Female 7.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.0
71211419 Antisense, RP_050816_01_E09, Mouse strain C57BL/6J (56 days, male) 1.4
72283647 Antisense, RP_051019_01_H01, Mouse strain C57BL/6J (56 days, male) 0.6

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