HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:24.3 nTPM
HPA Brain:21.8 nTPM
GTEx:24.3 nTPM
FANTOM5:82.0 Scaled Tags Per Million
Pig:35.1 nTPM
Mouse:35.3 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 21.8
Sample id Sample description nTPM
Hippocampus
nTPM: 19.9
2148 Female, age 91, left hemisphere 22.0
2529 Female, age 94, left hemisphere 21.0
1855 Male, age 76, left hemisphere 20.4
1911 Female, age 85, right hemisphere 19.2
2621 Female, age 67, right hemisphere 18.7
1898 Male, age 80, left hemisphere 18.3
Dentate gyrus
nTPM: 21.4
2531 Female, age 67, both hemispheres 23.9
2528 Male, age 74, both hemispheres 21.6
1927 Female, age 91, both hemispheres 21.2
2010 Male, age 76, both hemispheres 21.1
2246 Female, age 85, both hemispheres 20.7
2530 Female, age 94, left hemisphere 20.0
Entorhinal gyrus
nTPM: 19.1
2764 Male, age 80, right hemisphere 21.1
2613 Female, age 94, left hemisphere 19.7
2117 Female, age 91, right hemisphere 19.0
2686 Male, age 75, right hemisphere 19.0
1938 Female, age 85, left hemisphere 18.2
1787 Male, age 76, left hemisphere 17.4
Hippocampus, CA1
nTPM: 21.8
2045 Male, age 76, both hemispheres 25.1
2749 Male, age 80, left hemisphere 23.3
2082 Female, age 91, right hemisphere 20.7
2527 Male, age 74, both hemispheres 20.6
1873 Female, age 85, both hemispheres 19.0
Hippocampus, CA2
nTPM: 19.9
2113 Female, age 91, right hemisphere 20.9
2437 Female, age 94, left hemisphere 20.7
1940 Female, age 85, left hemisphere 20.4
2249 Male, age 74, both hemispheres 19.8
1963 Male, age 80, left hemisphere 19.1
1892 Male, age 76, both hemispheres 18.8
Hippocampus, CA3
nTPM: 20.4
2620 Female, age 94, left hemisphere 22.9
2436 Male, age 74, both hemispheres 21.8
2861 Female, age 67, both hemispheres 21.8
2137 Male, age 80, left hemisphere 20.2
1891 Female, age 85, both hemispheres 18.4
1867 Male, age 76, both hemispheres 17.4
Parahippocampal cortex
nTPM: 20.4
2622 Female, age 67, right hemisphere 22.6
2250 Female, age 67, right hemisphere 22.0
2018 Male, age 76, both hemispheres 21.7
2692 Male, age 74, both hemispheres 21.5
2532 Female, age 72, left hemisphere 21.2
1990 Female, age 91, right hemisphere 20.5
2245 Female, age 91, both hemispheres 19.5
2693 Female, age 94, both hemispheres 18.9
1933 Female, age 85, both hemispheres 18.6
1850 Male, age 80, both hemispheres 17.1
Perirhinal gyrus
nTPM: 19.1
1847 Female, age 91, left hemisphere 20.2
2521 Female, age 94, right hemisphere 19.2
2848 Male, age 76, right hemisphere 19.0
1794 Male, age 80, right hemisphere 18.5
1841 Female, age 85, right hemisphere 18.4
Subiculum
nTPM: 19.8
2729 Female, age 91, right hemisphere 24.0
2438 Female, age 94, left hemisphere 22.0
2042 Male, age 76, both hemispheres 19.1
1901 Male, age 80, both hemispheres 18.5
2619 Male, age 74, both hemispheres 18.3
1977 Female, age 85, both hemispheres 16.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 24.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 24.3
Samples: 197

Max nTPM: 43.6
Min nTPM: 9.6
Std nTPM: 6.0
Median nTPM: 24.2
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 43.6
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 40.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 39.5
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 38.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 38.4
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 38.1
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 37.2
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 35.4
GTEX-11ONC-0011-R1a-SM-57WD4 60-69 years, male 33.8
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 33.8
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 33.7
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 82.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 82.0
FF:10169-103B7 60 years, female 98.6
FF:10153-102I9 76 years, female 65.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 35.1
Pig sample Sample description nTPM
Subiculum
nTPM: 28.3
Samples: 4

Max nTPM: 38.0
Min nTPM: 23.2
Sample A Female 38.0
Sample B Female 25.1
Sample C Male 26.8
Sample D Male 23.2
Dorsal hippocampus
nTPM: 34.6
Samples: 4

Max nTPM: 45.8
Min nTPM: 26.6
Sample A Female 45.8
Sample B Female 32.1
Sample C Male 34.0
Sample D Male 26.6
Entorhinal cortex
nTPM: 35.1
Samples: 4

Max nTPM: 37.8
Min nTPM: 32.0
Sample A Female 33.9
Sample B Female 36.7
Sample C Male 37.8
Sample D Male 32.0
Ventral hippocampus
nTPM: 32.1
Samples: 4

Max nTPM: 38.4
Min nTPM: 23.5
Sample A Female 30.7
Sample B Female 23.5
Sample C Male 38.4
Sample D Male 35.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 35.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 32.9
Samples: 4

Max nTPM: 35.4
Min nTPM: 29.2
Sample A Male 35.4
Sample B Male 32.3
Sample C Female 29.2
Sample D Female 34.5
Hippocampal formation
nTPM: 35.4
Samples: 4

Max nTPM: 38.5
Min nTPM: 33.9
Sample A Male 34.1
Sample B Male 38.5
Sample C Female 34.9
Sample D Female 33.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
72002079 Antisense, RP_050915_02_F10, Mouse strain C57BL/6J (56 days, male) 0.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org