HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
RNA expressioni
Consensus:21.2 nTPM
HPA Brain:29.1 nTPM
GTEx:21.2 nTPM
FANTOM5:31.8 Scaled Tags Per Million
Pig:29.3 nTPM
Mouse:24.9 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA026966
Glial cells High
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 29.1
Sample id Sample description nTPM
Hippocampus
nTPM: 29.0
1898 Male, age 80, left hemisphere 34.1
2148 Female, age 91, left hemisphere 31.1
1855 Male, age 76, left hemisphere 27.8
1911 Female, age 85, right hemisphere 27.5
2621 Female, age 67, right hemisphere 27.3
2529 Female, age 94, left hemisphere 26.3
Dentate gyrus
nTPM: 29.0
2010 Male, age 76, both hemispheres 33.6
2530 Female, age 94, left hemisphere 32.4
2528 Male, age 74, both hemispheres 31.3
1927 Female, age 91, both hemispheres 28.8
2246 Female, age 85, both hemispheres 24.6
2531 Female, age 67, both hemispheres 23.2
Entorhinal gyrus
nTPM: 25.5
2117 Female, age 91, right hemisphere 28.8
1938 Female, age 85, left hemisphere 27.4
2613 Female, age 94, left hemisphere 26.1
1787 Male, age 76, left hemisphere 26.0
2686 Male, age 75, right hemisphere 23.0
2764 Male, age 80, right hemisphere 21.8
Hippocampus, CA1
nTPM: 28.4
2527 Male, age 74, both hemispheres 33.5
1873 Female, age 85, both hemispheres 28.6
2082 Female, age 91, right hemisphere 28.0
2045 Male, age 76, both hemispheres 26.6
2749 Male, age 80, left hemisphere 25.2
Hippocampus, CA2
nTPM: 29.1
2437 Female, age 94, left hemisphere 31.5
1963 Male, age 80, left hemisphere 30.8
2249 Male, age 74, both hemispheres 30.7
1892 Male, age 76, both hemispheres 30.1
2113 Female, age 91, right hemisphere 26.2
1940 Female, age 85, left hemisphere 25.4
Hippocampus, CA3
nTPM: 25.7
2436 Male, age 74, both hemispheres 35.0
1867 Male, age 76, both hemispheres 28.3
2861 Female, age 67, both hemispheres 26.8
1891 Female, age 85, both hemispheres 25.7
2620 Female, age 94, left hemisphere 20.1
2137 Male, age 80, left hemisphere 18.0
Parahippocampal cortex
nTPM: 25.9
2018 Male, age 76, both hemispheres 31.5
2693 Female, age 94, both hemispheres 28.3
2250 Female, age 67, right hemisphere 28.1
2692 Male, age 74, both hemispheres 27.5
1850 Male, age 80, both hemispheres 25.6
1933 Female, age 85, both hemispheres 25.0
1990 Female, age 91, right hemisphere 24.1
2622 Female, age 67, right hemisphere 24.1
2245 Female, age 91, both hemispheres 23.9
2532 Female, age 72, left hemisphere 20.7
Perirhinal gyrus
nTPM: 24.0
1847 Female, age 91, left hemisphere 29.0
1841 Female, age 85, right hemisphere 25.8
1794 Male, age 80, right hemisphere 23.7
2521 Female, age 94, right hemisphere 22.4
2848 Male, age 76, right hemisphere 19.1
Subiculum
nTPM: 26.4
2729 Female, age 91, right hemisphere 34.5
2042 Male, age 76, both hemispheres 29.3
2619 Male, age 74, both hemispheres 26.8
1977 Female, age 85, both hemispheres 23.8
2438 Female, age 94, left hemisphere 23.7
1901 Male, age 80, both hemispheres 20.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 21.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 21.2
Samples: 197

Max nTPM: 40.0
Min nTPM: 9.4
Std nTPM: 5.0
Median nTPM: 20.6
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 40.0
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 36.0
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 34.6
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 34.3
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 31.9
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 31.3
GTEX-16Z82-0011-R1b-SM-7EPHZ 60-69 years, male 30.9
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 30.4
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 30.4
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 30.3
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 30.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 31.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 31.8
FF:10169-103B7 60 years, female 33.2
FF:10153-102I9 76 years, female 30.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 29.3
Pig sample Sample description nTPM
Subiculum
nTPM: 27.4
Samples: 4

Max nTPM: 29.2
Min nTPM: 24.8
Sample A Female 29.2
Sample B Female 27.5
Sample C Male 24.8
Sample D Male 28.2
Dorsal hippocampus
nTPM: 25.7
Samples: 4

Max nTPM: 29.9
Min nTPM: 23.2
Sample A Female 29.9
Sample B Female 25.8
Sample C Male 23.2
Sample D Male 23.7
Entorhinal cortex
nTPM: 29.3
Samples: 4

Max nTPM: 32.1
Min nTPM: 25.3
Sample A Female 30.7
Sample B Female 32.1
Sample C Male 29.1
Sample D Male 25.3
Ventral hippocampus
nTPM: 24.7
Samples: 4

Max nTPM: 28.5
Min nTPM: 22.8
Sample A Female 24.2
Sample B Female 23.2
Sample C Male 28.5
Sample D Male 22.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 24.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 21.0
Samples: 4

Max nTPM: 24.3
Min nTPM: 17.5
Sample A Male 22.6
Sample B Male 19.7
Sample C Female 24.3
Sample D Female 17.5
Hippocampal formation
nTPM: 24.9
Samples: 4

Max nTPM: 27.1
Min nTPM: 22.9
Sample A Male 23.9
Sample B Male 22.9
Sample C Female 27.1
Sample D Female 25.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
77332711 Antisense, RP_070116_02_B09, Mouse strain C57BL/6J (56 days, male) 0.3
71020778 Antisense, RP_050505_01_G02, Mouse strain C57BL/6J (56 days, male) 0.2

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