HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Low
RNA expressioni
Consensus:8.8 nTPM
HPA Brain:33.0 nTPM
GTEx:8.8 nTPM
FANTOM5:28.6 Scaled Tags Per Million
Pig:26.5 nTPM
Mouse:18.0 nTPM
Allen mouse:2.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA004198
Glial cells Medium
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 33.0
Sample id Sample description nTPM
Hippocampus
nTPM: 32.8
1855 Male, age 76, left hemisphere 37.0
2621 Female, age 67, right hemisphere 35.3
1911 Female, age 85, right hemisphere 34.2
2148 Female, age 91, left hemisphere 31.9
2529 Female, age 94, left hemisphere 31.2
1898 Male, age 80, left hemisphere 27.2
Dentate gyrus
nTPM: 30.0
2246 Female, age 85, both hemispheres 34.3
2531 Female, age 67, both hemispheres 32.4
2010 Male, age 76, both hemispheres 30.3
2530 Female, age 94, left hemisphere 30.0
1927 Female, age 91, both hemispheres 28.4
2528 Male, age 74, both hemispheres 24.2
Entorhinal gyrus
nTPM: 31.1
2613 Female, age 94, left hemisphere 35.3
2764 Male, age 80, right hemisphere 30.8
2117 Female, age 91, right hemisphere 30.7
2686 Male, age 75, right hemisphere 30.4
1787 Male, age 76, left hemisphere 30.0
1938 Female, age 85, left hemisphere 29.5
Hippocampus, CA1
nTPM: 31.2
2749 Male, age 80, left hemisphere 35.5
1873 Female, age 85, both hemispheres 31.4
2045 Male, age 76, both hemispheres 31.4
2527 Male, age 74, both hemispheres 30.2
2082 Female, age 91, right hemisphere 27.5
Hippocampus, CA2
nTPM: 28.5
1892 Male, age 76, both hemispheres 30.5
2437 Female, age 94, left hemisphere 30.3
1940 Female, age 85, left hemisphere 28.6
1963 Male, age 80, left hemisphere 28.4
2113 Female, age 91, right hemisphere 27.9
2249 Male, age 74, both hemispheres 25.3
Hippocampus, CA3
nTPM: 33.0
2620 Female, age 94, left hemisphere 39.3
2137 Male, age 80, left hemisphere 35.5
1891 Female, age 85, both hemispheres 33.6
2861 Female, age 67, both hemispheres 31.4
1867 Male, age 76, both hemispheres 29.0
2436 Male, age 74, both hemispheres 28.9
Parahippocampal cortex
nTPM: 31.2
2245 Female, age 91, both hemispheres 35.2
2532 Female, age 72, left hemisphere 34.3
2622 Female, age 67, right hemisphere 33.6
2692 Male, age 74, both hemispheres 32.8
2693 Female, age 94, both hemispheres 31.5
1850 Male, age 80, both hemispheres 30.8
1990 Female, age 91, right hemisphere 29.4
2018 Male, age 76, both hemispheres 28.9
1933 Female, age 85, both hemispheres 28.4
2250 Female, age 67, right hemisphere 26.6
Perirhinal gyrus
nTPM: 29.5
2848 Male, age 76, right hemisphere 32.5
2521 Female, age 94, right hemisphere 31.4
1794 Male, age 80, right hemisphere 28.4
1847 Female, age 91, left hemisphere 27.7
1841 Female, age 85, right hemisphere 27.4
Subiculum
nTPM: 32.5
2438 Female, age 94, left hemisphere 39.7
1901 Male, age 80, both hemispheres 34.8
2042 Male, age 76, both hemispheres 33.6
2619 Male, age 74, both hemispheres 31.4
1977 Female, age 85, both hemispheres 30.1
2729 Female, age 91, right hemisphere 25.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 8.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 8.8
Samples: 197

Max nTPM: 15.5
Min nTPM: 4.1
Std nTPM: 1.8
Median nTPM: 8.6
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 15.5
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 14.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 13.7
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 13.4
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 12.8
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 12.7
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 12.6
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 12.5
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 12.4
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 12.3
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 12.2
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 28.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 28.6
FF:10153-102I9 76 years, female 34.4
FF:10169-103B7 60 years, female 22.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 26.5
Pig sample Sample description nTPM
Subiculum
nTPM: 25.7
Samples: 4

Max nTPM: 29.9
Min nTPM: 24.0
Sample A Female 29.9
Sample B Female 24.0
Sample C Male 24.8
Sample D Male 24.2
Dorsal hippocampus
nTPM: 25.6
Samples: 4

Max nTPM: 27.0
Min nTPM: 23.6
Sample A Female 27.0
Sample B Female 24.8
Sample C Male 27.0
Sample D Male 23.6
Entorhinal cortex
nTPM: 26.5
Samples: 4

Max nTPM: 28.6
Min nTPM: 24.7
Sample A Female 28.6
Sample B Female 24.7
Sample C Male 25.4
Sample D Male 27.2
Ventral hippocampus
nTPM: 23.4
Samples: 4

Max nTPM: 26.3
Min nTPM: 20.2
Sample A Female 20.2
Sample B Female 21.1
Sample C Male 26.3
Sample D Male 25.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 18.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 18.0
Samples: 4

Max nTPM: 21.1
Min nTPM: 16.2
Sample A Male 17.9
Sample B Male 16.9
Sample C Female 16.2
Sample D Female 21.1
Hippocampal formation
nTPM: 16.6
Samples: 4

Max nTPM: 19.7
Min nTPM: 12.6
Sample A Male 12.6
Sample B Male 19.5
Sample C Female 19.7
Sample D Female 14.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.3
70539109 Antisense, RP_050321_02_H10, Mouse strain C57BL/6J (56 days, male) 2.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org