HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:554.2 nTPM
HPA Brain:233.8 nTPM
GTEx:554.2 nTPM
FANTOM5:20.9 Scaled Tags Per Million
Pig:362.5 nTPM
Mouse:164.8 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA053803
Glial cells Not detected
Neuronal cells Medium


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 233.8
Sample id Sample description nTPM
Hippocampus
nTPM: 223.7
1898 Male, age 80, left hemisphere 264.4
2529 Female, age 94, left hemisphere 246.7
2621 Female, age 67, right hemisphere 233.4
1911 Female, age 85, right hemisphere 209.7
1855 Male, age 76, left hemisphere 194.1
2148 Female, age 91, left hemisphere 193.7
Dentate gyrus
nTPM: 233.8
2530 Female, age 94, left hemisphere 303.7
2010 Male, age 76, both hemispheres 241.3
1927 Female, age 91, both hemispheres 225.1
2246 Female, age 85, both hemispheres 222.6
2531 Female, age 67, both hemispheres 208.9
2528 Male, age 74, both hemispheres 201.5
Entorhinal gyrus
nTPM: 219.5
2686 Male, age 75, right hemisphere 253.8
1938 Female, age 85, left hemisphere 229.5
1787 Male, age 76, left hemisphere 219.3
2117 Female, age 91, right hemisphere 218.1
2764 Male, age 80, right hemisphere 209.8
2613 Female, age 94, left hemisphere 186.5
Hippocampus, CA1
nTPM: 226.3
2749 Male, age 80, left hemisphere 258.6
1873 Female, age 85, both hemispheres 240.7
2045 Male, age 76, both hemispheres 214.2
2082 Female, age 91, right hemisphere 213.1
2527 Male, age 74, both hemispheres 205.1
Hippocampus, CA2
nTPM: 228.0
1892 Male, age 76, both hemispheres 266.8
1963 Male, age 80, left hemisphere 255.7
2437 Female, age 94, left hemisphere 224.8
1940 Female, age 85, left hemisphere 208.3
2249 Male, age 74, both hemispheres 206.9
2113 Female, age 91, right hemisphere 205.6
Hippocampus, CA3
nTPM: 208.5
1867 Male, age 76, both hemispheres 247.4
2137 Male, age 80, left hemisphere 225.1
2861 Female, age 67, both hemispheres 221.6
1891 Female, age 85, both hemispheres 210.9
2436 Male, age 74, both hemispheres 177.2
2620 Female, age 94, left hemisphere 168.8
Parahippocampal cortex
nTPM: 200.0
2018 Male, age 76, both hemispheres 229.8
1850 Male, age 80, both hemispheres 225.4
2250 Female, age 67, right hemisphere 217.3
1990 Female, age 91, right hemisphere 215.2
2245 Female, age 91, both hemispheres 213.0
1933 Female, age 85, both hemispheres 205.2
2532 Female, age 72, left hemisphere 190.0
2692 Male, age 74, both hemispheres 183.6
2622 Female, age 67, right hemisphere 167.7
2693 Female, age 94, both hemispheres 152.7
Perirhinal gyrus
nTPM: 223.7
1841 Female, age 85, right hemisphere 249.1
1847 Female, age 91, left hemisphere 242.7
1794 Male, age 80, right hemisphere 230.6
2848 Male, age 76, right hemisphere 213.9
2521 Female, age 94, right hemisphere 182.3
Subiculum
nTPM: 215.6
1977 Female, age 85, both hemispheres 251.8
2042 Male, age 76, both hemispheres 238.4
2438 Female, age 94, left hemisphere 227.5
1901 Male, age 80, both hemispheres 211.6
2729 Female, age 91, right hemisphere 182.9
2619 Male, age 74, both hemispheres 181.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 554.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 554.2
Samples: 197

Max nTPM: 1727.4
Min nTPM: 308.8
Std nTPM: 175.9
Median nTPM: 507.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 1727.4
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 1172.4
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 1166.4
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 1027.1
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 964.0
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 917.3
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 908.3
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 905.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 869.9
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 854.5
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 852.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 20.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 20.9
FF:10169-103B7 60 years, female 27.0
FF:10153-102I9 76 years, female 14.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 362.5
Pig sample Sample description nTPM
Subiculum
nTPM: 296.3
Samples: 4

Max nTPM: 405.2
Min nTPM: 237.0
Sample A Female 405.2
Sample B Female 291.3
Sample C Male 237.0
Sample D Male 251.8
Dorsal hippocampus
nTPM: 362.5
Samples: 4

Max nTPM: 469.2
Min nTPM: 238.8
Sample A Female 469.2
Sample B Female 356.2
Sample C Male 385.6
Sample D Male 238.8
Entorhinal cortex
nTPM: 317.4
Samples: 4

Max nTPM: 450.1
Min nTPM: 202.2
Sample A Female 248.7
Sample B Female 450.1
Sample C Male 368.6
Sample D Male 202.2
Ventral hippocampus
nTPM: 322.6
Samples: 4

Max nTPM: 364.9
Min nTPM: 286.5
Sample A Female 347.1
Sample B Female 291.7
Sample C Male 364.9
Sample D Male 286.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 164.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 164.3
Samples: 4

Max nTPM: 197.9
Min nTPM: 137.2
Sample A Male 137.2
Sample B Male 144.0
Sample C Female 197.9
Sample D Female 178.1
Hippocampal formation
nTPM: 164.8
Samples: 4

Max nTPM: 202.7
Min nTPM: 149.2
Sample A Male 202.7
Sample B Male 149.2
Sample C Female 157.8
Sample D Female 149.6

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