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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
348.5
nTPM
FANTOM5:
29.7
Scaled Tags Per Million
Pig:
0.5
nTPM
PONS - HPA Brain RNA-seq
Max nTPM
348.5
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 286.0
2188
Female, age 91, both hemispheres
357.1
2090
Male, age 80, both hemispheres
350.4
1984
Male, age 76, both hemispheres
227.9
2301
Female, age 85, both hemispheres
208.6
Dorsal cochlear nucleus nTPM: 302.2
2802
Male, age 74, right hemisphere
346.6
2187
Female, age 91, both hemispheres
337.4
2378
Male, age 80, both hemispheres
316.2
2370
Male, age 61, both hemispheres
309.5
2058
Male, age 76, both hemispheres
201.4
Dorsal tegmental nucleus nTPM: 272.8
2326
Male, age 74, both hemispheres
314.4
2083
Male, age 80, both hemispheres
310.5
1936
Male, age 76, left hemisphere
258.0
2358
Male, age 61, both hemispheres
208.1
Dorsolateral tegmental area nTPM: 303.1
2654
Male, age 80, both hemispheres
346.9
2360
Male, age 74, both hemispheres
325.1
2751
Female, age 85, both hemispheres
323.9
2337
Male, age 61, both hemispheres
310.8
2141
Male, age 76, both hemispheres
208.7
Kolliker-Fuse nucleus nTPM: 276.9
2315
Male, age 76, right hemisphere
349.4
2163
Male, age 80, both hemispheres
247.8
2793
Female, age 91, left hemisphere
233.6
Lateral lemniscal nuclei nTPM: 223.5
2746
Female, age 85, left hemisphere
250.2
2036
Male, age 80, both hemispheres
248.5
2320
Female, age 91, left hemisphere
211.1
2169
Male, age 76, both hemispheres
204.5
2453
Male, age 74, right hemisphere
203.1
Lateral parabrachial nucleus nTPM: 323.0
2792
Male, age 76, both hemispheres
384.9
2013
Male, age 80, both hemispheres
342.7
2790
Male, age 61, both hemispheres
289.7
2139
Female, age 85, right hemisphere
274.6
Lateral vestibular nucleus nTPM: 239.1
2311
Male, age 80, both hemispheres
276.1
2184
Male, age 76, both hemispheres
202.0
Locus coeruleus nTPM: 259.4
2123
Female, age 91, both hemispheres
295.2
2317
Female, age 72, unknown
287.0
2014
Male, age 55, unknown
265.4
2720
Male, age 74, both hemispheres
256.1
2788
Male, age 74, unknown
248.3
2162
Male, age 80, both hemispheres
241.5
1980
Male, age 76, both hemispheres
222.0
Medial parabrachial nucleus nTPM: 265.5
2170
Female, age 91, both hemispheres
344.5
2463
Female, age 85, right hemisphere
256.6
2854
Male, age 80, both hemispheres
255.9
2156
Male, age 61, both hemispheres
240.5
2786
Male, age 76, both hemispheres
229.7
Medial periolivary nuclei nTPM: 249.3
2081
Male, age 80, both hemispheres
281.9
2791
Male, age 74, right hemisphere
273.3
2063
Male, age 76, both hemispheres
257.4
2458
Female, age 91, both hemispheres
238.2
2171
Female, age 85, both hemispheres
196.0
Motor facial nucleus nTPM: 231.4
2795
Female, age 91, both hemispheres
277.1
2365
Male, age 74, right hemisphere
267.1
2126
Male, age 61, both hemispheres
266.6
2062
Male, age 76, both hemispheres
216.7
2697
Female, age 85, both hemispheres
206.0
2327
Male, age 80, both hemispheres
155.0
Motor trigeminal nucleus nTPM: 234.0
2309
Male, age 76, both hemispheres
250.1
2560
Male, age 74, both hemispheres
246.0
2335
Male, age 61, both hemispheres
234.3
2321
Female, age 91, both hemispheres
227.2
2079
Male, age 80, both hemispheres
212.4
Nuclei of the trapezoid body nTPM: 227.3
1983
Male, age 76, both hemispheres
290.0
2166
Male, age 80, both hemispheres
230.6
2368
Female, age 91, both hemispheres
215.6
2159
Male, age 61, both hemispheres
210.8
2735
Female, age 85, both hemispheres
189.3
Nucleus raphe magnus nTPM: 213.5
2051
Male, age 76, both hemispheres
242.6
2459
Female, age 91, both hemispheres
223.4
2455
Male, age 74, both hemispheres
216.4
2160
Male, age 61, both hemispheres
210.2
2328
Male, age 80, both hemispheres
209.6
2172
Female, age 85, both hemispheres
178.6
Paramedian reticular nucleus nTPM: 295.2
2052
Male, age 76, both hemispheres
357.2
2057
Male, age 80, both hemispheres
284.2
2050
Female, age 85, both hemispheres
271.2
2313
Male, age 61, both hemispheres
268.1
Pedunculopontine tegmental nucleus nTPM: 277.5
2338
Male, age 61, both hemispheres
309.7
2334
Male, age 80, both hemispheres
286.7
1921
Female, age 85, both hemispheres
236.0
Pontine nuclei nTPM: 260.8
2319
Female, age 91, both hemispheres
316.8
1863
Male, age 55, unknown
293.3
2454
Male, age 74, left hemisphere
276.9
2109
Female, age 72, unknown
258.1
2115
Male, age 80, left hemisphere
251.6
1968
Male, age 76, left hemisphere
241.2
2727
Male, age 61, right hemisphere
236.4
2787
Female, age 85, both hemispheres
212.2
Pontine raphe nucleus nTPM: 257.4
2853
Male, age 76, midline
264.3
2122
Female, age 85, midline
250.6
Posteroventral cochlear nucleus nTPM: 348.5
2341
Male, age 80, both hemispheres
459.8
2135
Female, age 91, both hemispheres
390.4
2371
Male, age 61, both hemispheres
349.7
2752
Female, age 85, both hemispheres
286.4
2070
Male, age 76, both hemispheres
256.1
Principal sensory trigeminal nucleus nTPM: 220.9
2367
Female, age 91, left hemisphere
251.3
2008
Male, age 80, left hemisphere
226.9
2158
Male, age 61, both hemispheres
218.0
2324
Male, age 76, both hemispheres
187.2
Reticular pontine nucleus, caudal nTPM: 246.4
2559
Male, age 74, both hemispheres
303.3
2092
Male, age 76, both hemispheres
271.1
2457
Female, age 91, both hemispheres
258.7
2332
Male, age 80, right hemisphere
152.7
Reticular pontine nucleus, oral nTPM: 272.7
1939
Male, age 80, both hemispheres
318.2
2366
Female, age 91, both hemispheres
280.4
2012
Female, age 85, both hemispheres
272.2
2361
Male, age 74, both hemispheres
254.5
2167
Male, age 76, both hemispheres
238.3
Reticulotegmental nucleus nTPM: 250.8
2452
Male, age 74, both hemispheres
283.7
2322
Female, age 91, both hemispheres
250.1
2333
Male, age 80, both hemispheres
249.4
2325
Male, age 76, both hemispheres
220.1
Spinal trigeminal nucleus, oral nTPM: 234.8
2164
Male, age 80, both hemispheres
241.7
2737
Female, age 85, both hemispheres
239.3
1978
Male, age 76, both hemispheres
223.5
Subcoeruleus area nTPM: 286.2
2369
Female, age 85, left hemisphere
361.3
2451
Male, age 74, both hemispheres
349.2
1958
Male, age 80, both hemispheres
269.1
2323
Female, age 91, left hemisphere
242.4
2089
Male, age 76, left hemisphere
209.0
Superior olive nTPM: 242.3
2020
Male, age 76, both hemispheres
310.5
2364
Male, age 74, right hemisphere
266.8
2561
Female, age 91, both hemispheres
237.0
1875
Female, age 85, both hemispheres
215.0
2329
Male, age 80, right hemisphere
182.4
Ventral periolivary nuclei nTPM: 232.6
2023
Male, age 76, both hemispheres
309.3
2794
Female, age 91, left hemisphere
256.4
2165
Male, age 80, both hemispheres
226.1
2130
Female, age 85, both hemispheres
138.4
Ventrolateral tegmental area, A5 NE cell group nTPM: 234.3
2359
Male, age 61, both hemispheres
272.0
2161
Male, age 80, both hemispheres
245.8
2456
Female, age 91, both hemispheres
242.8
1959
Male, age 76, both hemispheres
228.8
2840
Female, age 85, both hemispheres
213.6
2449
Male, age 74, both hemispheres
202.7
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
