HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:16.9 nTPM
HPA Brain:33.7 nTPM
GTEx:16.9 nTPM
FANTOM5:68.7 Scaled Tags Per Million
Pig:69.8 nTPM
Mouse:152.8 nTPM
Allen mouse:17.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA035538Antibody HPA035539
Glial cells LowNot detected
Neuronal cells Not detectedLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 33.7
Sample id Sample description nTPM
Hippocampus
nTPM: 26.1
1898 Male, age 80, left hemisphere 34.6
1855 Male, age 76, left hemisphere 29.9
2621 Female, age 67, right hemisphere 24.9
2529 Female, age 94, left hemisphere 24.8
1911 Female, age 85, right hemisphere 23.6
2148 Female, age 91, left hemisphere 18.7
Dentate gyrus
nTPM: 24.1
2010 Male, age 76, both hemispheres 29.5
1927 Female, age 91, both hemispheres 26.4
2246 Female, age 85, both hemispheres 25.7
2528 Male, age 74, both hemispheres 23.7
2530 Female, age 94, left hemisphere 20.4
2531 Female, age 67, both hemispheres 18.8
Entorhinal gyrus
nTPM: 24.6
1938 Female, age 85, left hemisphere 28.3
2764 Male, age 80, right hemisphere 27.2
2117 Female, age 91, right hemisphere 25.2
1787 Male, age 76, left hemisphere 24.8
2613 Female, age 94, left hemisphere 22.1
2686 Male, age 75, right hemisphere 19.8
Hippocampus, CA1
nTPM: 30.5
2749 Male, age 80, left hemisphere 45.9
1873 Female, age 85, both hemispheres 33.6
2527 Male, age 74, both hemispheres 30.6
2045 Male, age 76, both hemispheres 23.6
2082 Female, age 91, right hemisphere 18.8
Hippocampus, CA2
nTPM: 28.2
1892 Male, age 76, both hemispheres 37.6
1963 Male, age 80, left hemisphere 33.9
2249 Male, age 74, both hemispheres 29.6
1940 Female, age 85, left hemisphere 26.7
2437 Female, age 94, left hemisphere 21.3
2113 Female, age 91, right hemisphere 20.1
Hippocampus, CA3
nTPM: 26.7
2137 Male, age 80, left hemisphere 35.5
2436 Male, age 74, both hemispheres 33.2
1867 Male, age 76, both hemispheres 30.8
1891 Female, age 85, both hemispheres 25.6
2620 Female, age 94, left hemisphere 19.7
2861 Female, age 67, both hemispheres 15.3
Parahippocampal cortex
nTPM: 26.3
1850 Male, age 80, both hemispheres 40.1
1933 Female, age 85, both hemispheres 29.1
1990 Female, age 91, right hemisphere 27.8
2250 Female, age 67, right hemisphere 26.2
2245 Female, age 91, both hemispheres 25.7
2693 Female, age 94, both hemispheres 25.5
2532 Female, age 72, left hemisphere 25.0
2018 Male, age 76, both hemispheres 23.6
2692 Male, age 74, both hemispheres 22.2
2622 Female, age 67, right hemisphere 18.2
Perirhinal gyrus
nTPM: 33.7
1847 Female, age 91, left hemisphere 37.5
1841 Female, age 85, right hemisphere 36.2
1794 Male, age 80, right hemisphere 36.0
2521 Female, age 94, right hemisphere 30.3
2848 Male, age 76, right hemisphere 28.4
Subiculum
nTPM: 26.2
1977 Female, age 85, both hemispheres 30.5
1901 Male, age 80, both hemispheres 28.5
2438 Female, age 94, left hemisphere 26.4
2619 Male, age 74, both hemispheres 24.9
2042 Male, age 76, both hemispheres 24.7
2729 Female, age 91, right hemisphere 22.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 16.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 16.9
Samples: 197

Max nTPM: 35.7
Min nTPM: 6.2
Std nTPM: 5.5
Median nTPM: 16.3
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 35.7
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 30.7
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 30.5
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 30.0
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 29.2
GTEX-1IDJH-0011-R1b-SM-ARU6U 70-79 years, male 29.2
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 28.6
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 28.5
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 27.7
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 27.7
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 27.7
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 68.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 68.7
FF:10153-102I9 76 years, female 68.9
FF:10169-103B7 60 years, female 68.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 69.8
Pig sample Sample description nTPM
Subiculum
nTPM: 31.7
Samples: 4

Max nTPM: 38.5
Min nTPM: 28.2
Sample A Female 38.5
Sample B Female 28.8
Sample C Male 31.4
Sample D Male 28.2
Dorsal hippocampus
nTPM: 69.8
Samples: 4

Max nTPM: 95.1
Min nTPM: 48.8
Sample A Female 95.1
Sample B Female 79.6
Sample C Male 48.8
Sample D Male 55.6
Entorhinal cortex
nTPM: 30.4
Samples: 4

Max nTPM: 34.2
Min nTPM: 25.5
Sample A Female 34.2
Sample B Female 33.2
Sample C Male 28.8
Sample D Male 25.5
Ventral hippocampus
nTPM: 53.9
Samples: 4

Max nTPM: 85.8
Min nTPM: 32.3
Sample A Female 55.4
Sample B Female 32.3
Sample C Male 42.2
Sample D Male 85.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 152.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 124.7
Samples: 4

Max nTPM: 129.4
Min nTPM: 122.6
Sample A Male 122.7
Sample B Male 122.6
Sample C Female 129.4
Sample D Female 124.2
Hippocampal formation
nTPM: 152.8
Samples: 4

Max nTPM: 163.0
Min nTPM: 142.2
Sample A Male 149.5
Sample B Male 163.0
Sample C Female 156.5
Sample D Female 142.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 17.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 17.0
77620796 Antisense, RP_070129_03_G09, Mouse strain C57BL/6J (56 days, male) 17.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org