HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:37.8 nTPM
HPA Brain:111.5 nTPM
GTEx:37.8 nTPM
FANTOM5:49.4 Scaled Tags Per Million
Pig:27.3 nTPM
Mouse:185.4 nTPM
Allen mouse:8.0 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 111.5
Sample id Sample description nTPM
Hippocampus
nTPM: 99.5
2621 Female, age 67, right hemisphere 124.2
1855 Male, age 76, left hemisphere 120.7
2148 Female, age 91, left hemisphere 114.8
1898 Male, age 80, left hemisphere 99.1
1911 Female, age 85, right hemisphere 75.4
2529 Female, age 94, left hemisphere 62.5
Dentate gyrus
nTPM: 92.3
2530 Female, age 94, left hemisphere 108.1
2531 Female, age 67, both hemispheres 104.9
2010 Male, age 76, both hemispheres 102.2
1927 Female, age 91, both hemispheres 98.9
2528 Male, age 74, both hemispheres 72.0
2246 Female, age 85, both hemispheres 67.8
Entorhinal gyrus
nTPM: 76.7
2613 Female, age 94, left hemisphere 124.9
1938 Female, age 85, left hemisphere 77.5
2764 Male, age 80, right hemisphere 76.4
2686 Male, age 75, right hemisphere 73.2
1787 Male, age 76, left hemisphere 60.1
2117 Female, age 91, right hemisphere 48.0
Hippocampus, CA1
nTPM: 89.6
2749 Male, age 80, left hemisphere 143.1
2527 Male, age 74, both hemispheres 95.5
1873 Female, age 85, both hemispheres 83.0
2082 Female, age 91, right hemisphere 66.4
2045 Male, age 76, both hemispheres 60.2
Hippocampus, CA2
nTPM: 79.3
1963 Male, age 80, left hemisphere 144.8
2113 Female, age 91, right hemisphere 80.7
1892 Male, age 76, both hemispheres 70.8
2249 Male, age 74, both hemispheres 61.6
1940 Female, age 85, left hemisphere 60.6
2437 Female, age 94, left hemisphere 57.6
Hippocampus, CA3
nTPM: 95.6
2861 Female, age 67, both hemispheres 154.1
2137 Male, age 80, left hemisphere 142.7
2620 Female, age 94, left hemisphere 110.5
2436 Male, age 74, both hemispheres 66.3
1891 Female, age 85, both hemispheres 51.9
1867 Male, age 76, both hemispheres 48.1
Parahippocampal cortex
nTPM: 71.4
2622 Female, age 67, right hemisphere 113.5
2245 Female, age 91, both hemispheres 89.6
1850 Male, age 80, both hemispheres 81.5
2692 Male, age 74, both hemispheres 69.5
1933 Female, age 85, both hemispheres 67.5
2693 Female, age 94, both hemispheres 67.1
2250 Female, age 67, right hemisphere 64.2
2532 Female, age 72, left hemisphere 62.2
1990 Female, age 91, right hemisphere 49.7
2018 Male, age 76, both hemispheres 49.2
Perirhinal gyrus
nTPM: 78.4
1847 Female, age 91, left hemisphere 91.9
2521 Female, age 94, right hemisphere 88.8
1794 Male, age 80, right hemisphere 75.0
1841 Female, age 85, right hemisphere 72.6
2848 Male, age 76, right hemisphere 63.4
Subiculum
nTPM: 111.5
2438 Female, age 94, left hemisphere 369.9
2729 Female, age 91, right hemisphere 71.6
1901 Male, age 80, both hemispheres 70.2
2042 Male, age 76, both hemispheres 54.5
1977 Female, age 85, both hemispheres 52.4
2619 Male, age 74, both hemispheres 50.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 37.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 37.8
Samples: 197

Max nTPM: 118.1
Min nTPM: 1.2
Std nTPM: 25.1
Median nTPM: 33.2
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 118.1
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 107.8
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 101.3
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 97.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 96.8
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 91.6
GTEX-1B8L1-0011-R1a-SM-7P8SS 60-69 years, male 88.2
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 85.1
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 83.6
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 83.3
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 82.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 49.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 49.4
FF:10169-103B7 60 years, female 54.0
FF:10153-102I9 76 years, female 44.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 27.3
Pig sample Sample description nTPM
Subiculum
nTPM: 21.3
Samples: 4

Max nTPM: 23.5
Min nTPM: 19.5
Sample A Female 21.4
Sample B Female 19.5
Sample C Male 23.5
Sample D Male 20.9
Dorsal hippocampus
nTPM: 24.5
Samples: 4

Max nTPM: 30.0
Min nTPM: 17.2
Sample A Female 29.6
Sample B Female 30.0
Sample C Male 17.2
Sample D Male 21.3
Entorhinal cortex
nTPM: 22.9
Samples: 4

Max nTPM: 28.2
Min nTPM: 19.5
Sample A Female 23.8
Sample B Female 19.5
Sample C Male 28.2
Sample D Male 20.0
Ventral hippocampus
nTPM: 27.3
Samples: 4

Max nTPM: 40.6
Min nTPM: 20.7
Sample A Female 22.7
Sample B Female 20.7
Sample C Male 25.2
Sample D Male 40.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 185.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 103.3
Samples: 4

Max nTPM: 130.3
Min nTPM: 77.1
Sample A Male 92.7
Sample B Male 77.1
Sample C Female 113.1
Sample D Female 130.3
Hippocampal formation
nTPM: 185.4
Samples: 4

Max nTPM: 210.2
Min nTPM: 146.9
Sample A Male 175.6
Sample B Male 209.0
Sample C Female 210.2
Sample D Female 146.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.0
72340183 Antisense, RP_051101_02_B04, Mouse strain C57BL/6J (56 days, male) 11.8
69444789 Antisense, RP_050414_04_F05, Mouse strain C57BL/6J (56 days, male) 11.6
73808528 Antisense, RP_051212_03_B07, Mouse strain C57BL/6J (56 days, male) 0.4

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