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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
130.7
nTPM
FANTOM5:
228.9
Scaled Tags Per Million
Pig:
108.5
nTPM
PONS - HPA Brain RNA-seq
Max nTPM
130.7
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 119.0
2301
Female, age 85, both hemispheres
167.2
2090
Male, age 80, both hemispheres
121.1
2188
Female, age 91, both hemispheres
107.6
1984
Male, age 76, both hemispheres
80.1
Dorsal cochlear nucleus nTPM: 111.7
2370
Male, age 61, both hemispheres
136.8
2187
Female, age 91, both hemispheres
111.8
2378
Male, age 80, both hemispheres
111.4
2058
Male, age 76, both hemispheres
104.5
2802
Male, age 74, right hemisphere
94.3
Dorsal tegmental nucleus nTPM: 124.2
2358
Male, age 61, both hemispheres
146.2
2083
Male, age 80, both hemispheres
129.6
2326
Male, age 74, both hemispheres
117.6
1936
Male, age 76, left hemisphere
103.3
Dorsolateral tegmental area nTPM: 130.6
2337
Male, age 61, both hemispheres
161.5
2751
Female, age 85, both hemispheres
155.9
2654
Male, age 80, both hemispheres
126.4
2360
Male, age 74, both hemispheres
123.6
2141
Male, age 76, both hemispheres
85.6
Kolliker-Fuse nucleus nTPM: 119.1
2315
Male, age 76, right hemisphere
138.7
2793
Female, age 91, left hemisphere
114.4
2163
Male, age 80, both hemispheres
104.3
Lateral lemniscal nuclei nTPM: 96.0
2746
Female, age 85, left hemisphere
137.7
2036
Male, age 80, both hemispheres
101.4
2320
Female, age 91, left hemisphere
90.7
2169
Male, age 76, both hemispheres
84.4
2453
Male, age 74, right hemisphere
66.0
Lateral parabrachial nucleus nTPM: 130.7
2792
Male, age 76, both hemispheres
181.8
2790
Male, age 61, both hemispheres
127.6
2013
Male, age 80, both hemispheres
119.9
2139
Female, age 85, right hemisphere
93.3
Lateral vestibular nucleus nTPM: 120.9
2311
Male, age 80, both hemispheres
125.7
2184
Male, age 76, both hemispheres
116.1
Locus coeruleus nTPM: 80.2
2317
Female, age 72, unknown
94.7
2123
Female, age 91, both hemispheres
82.5
2162
Male, age 80, both hemispheres
80.0
2014
Male, age 55, unknown
79.8
2720
Male, age 74, both hemispheres
77.2
1980
Male, age 76, both hemispheres
75.4
2788
Male, age 74, unknown
71.6
Medial parabrachial nucleus nTPM: 123.3
2463
Female, age 85, right hemisphere
144.5
2170
Female, age 91, both hemispheres
133.3
2156
Male, age 61, both hemispheres
113.6
2786
Male, age 76, both hemispheres
113.2
2854
Male, age 80, both hemispheres
111.8
Medial periolivary nuclei nTPM: 102.9
2081
Male, age 80, both hemispheres
136.5
2791
Male, age 74, right hemisphere
113.4
2458
Female, age 91, both hemispheres
96.1
2063
Male, age 76, both hemispheres
88.5
2171
Female, age 85, both hemispheres
80.2
Motor facial nucleus nTPM: 104.8
2126
Male, age 61, both hemispheres
132.8
2697
Female, age 85, both hemispheres
122.9
2795
Female, age 91, both hemispheres
122.1
2365
Male, age 74, right hemisphere
88.3
2062
Male, age 76, both hemispheres
81.8
2327
Male, age 80, both hemispheres
81.1
Motor trigeminal nucleus nTPM: 100.0
2335
Male, age 61, both hemispheres
113.9
2309
Male, age 76, both hemispheres
107.2
2079
Male, age 80, both hemispheres
99.9
2321
Female, age 91, both hemispheres
93.5
2560
Male, age 74, both hemispheres
85.5
Nuclei of the trapezoid body nTPM: 87.7
2166
Male, age 80, both hemispheres
104.7
2368
Female, age 91, both hemispheres
104.4
1983
Male, age 76, both hemispheres
86.8
2159
Male, age 61, both hemispheres
74.5
2735
Female, age 85, both hemispheres
68.3
Nucleus raphe magnus nTPM: 93.2
2051
Male, age 76, both hemispheres
143.0
2459
Female, age 91, both hemispheres
100.8
2455
Male, age 74, both hemispheres
100.7
2328
Male, age 80, both hemispheres
93.5
2172
Female, age 85, both hemispheres
63.0
2160
Male, age 61, both hemispheres
58.2
Paramedian reticular nucleus nTPM: 108.3
2057
Male, age 80, both hemispheres
114.4
2052
Male, age 76, both hemispheres
113.5
2050
Female, age 85, both hemispheres
107.7
2313
Male, age 61, both hemispheres
97.8
Pedunculopontine tegmental nucleus nTPM: 107.4
2338
Male, age 61, both hemispheres
141.1
2334
Male, age 80, both hemispheres
101.1
1921
Female, age 85, both hemispheres
80.0
Pontine nuclei nTPM: 102.5
2109
Female, age 72, unknown
130.3
2115
Male, age 80, left hemisphere
123.9
2319
Female, age 91, both hemispheres
108.9
1968
Male, age 76, left hemisphere
100.8
2787
Female, age 85, both hemispheres
100.4
1863
Male, age 55, unknown
93.4
2454
Male, age 74, left hemisphere
81.8
2727
Male, age 61, right hemisphere
80.5
Pontine raphe nucleus nTPM: 82.4
2853
Male, age 76, midline
92.5
2122
Female, age 85, midline
72.4
Posteroventral cochlear nucleus nTPM: 113.0
2341
Male, age 80, both hemispheres
130.7
2070
Male, age 76, both hemispheres
123.8
2371
Male, age 61, both hemispheres
123.0
2135
Female, age 91, both hemispheres
116.5
2752
Female, age 85, both hemispheres
71.0
Principal sensory trigeminal nucleus nTPM: 92.9
2324
Male, age 76, both hemispheres
121.0
2367
Female, age 91, left hemisphere
100.2
2008
Male, age 80, left hemisphere
85.3
2158
Male, age 61, both hemispheres
65.2
Reticular pontine nucleus, caudal nTPM: 107.0
2092
Male, age 76, both hemispheres
123.0
2457
Female, age 91, both hemispheres
109.9
2559
Male, age 74, both hemispheres
101.6
2332
Male, age 80, right hemisphere
93.5
Reticular pontine nucleus, oral nTPM: 102.9
1939
Male, age 80, both hemispheres
122.5
2167
Male, age 76, both hemispheres
113.8
2012
Female, age 85, both hemispheres
108.2
2366
Female, age 91, both hemispheres
99.7
2361
Male, age 74, both hemispheres
70.5
Reticulotegmental nucleus nTPM: 102.5
2333
Male, age 80, both hemispheres
116.5
2322
Female, age 91, both hemispheres
110.3
2452
Male, age 74, both hemispheres
95.0
2325
Male, age 76, both hemispheres
88.2
Spinal trigeminal nucleus, oral nTPM: 96.6
2164
Male, age 80, both hemispheres
106.8
1978
Male, age 76, both hemispheres
98.6
2737
Female, age 85, both hemispheres
84.4
Subcoeruleus area nTPM: 109.9
2369
Female, age 85, left hemisphere
172.7
2089
Male, age 76, left hemisphere
99.1
1958
Male, age 80, both hemispheres
98.1
2451
Male, age 74, both hemispheres
95.7
2323
Female, age 91, left hemisphere
83.8
Superior olive nTPM: 108.3
2364
Male, age 74, right hemisphere
125.1
2020
Male, age 76, both hemispheres
124.6
1875
Female, age 85, both hemispheres
101.1
2329
Male, age 80, right hemisphere
100.7
2561
Female, age 91, both hemispheres
90.1
Ventral periolivary nuclei nTPM: 92.7
2023
Male, age 76, both hemispheres
131.8
2165
Male, age 80, both hemispheres
92.3
2794
Female, age 91, left hemisphere
73.6
2130
Female, age 85, both hemispheres
73.1
Ventrolateral tegmental area, A5 NE cell group nTPM: 115.6
2840
Female, age 85, both hemispheres
140.7
2359
Male, age 61, both hemispheres
128.1
1959
Male, age 76, both hemispheres
116.0
2456
Female, age 91, both hemispheres
112.1
2161
Male, age 80, both hemispheres
110.2
2449
Male, age 74, both hemispheres
86.7
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
