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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
269.0
nTPM
FANTOM5:
491.4
Scaled Tags Per Million
Pig:
143.0
nTPM
Allen mouse:
4.4
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
269.0
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 181.0
2188
Female, age 91, both hemispheres
192.6
2301
Female, age 85, both hemispheres
186.8
1984
Male, age 76, both hemispheres
181.9
2090
Male, age 80, both hemispheres
162.6
Dorsal cochlear nucleus nTPM: 176.1
2802
Male, age 74, right hemisphere
195.4
2187
Female, age 91, both hemispheres
187.4
2370
Male, age 61, both hemispheres
176.8
2058
Male, age 76, both hemispheres
170.6
2378
Male, age 80, both hemispheres
150.4
Dorsal tegmental nucleus nTPM: 177.9
2083
Male, age 80, both hemispheres
214.5
2326
Male, age 74, both hemispheres
174.5
2358
Male, age 61, both hemispheres
168.3
1936
Male, age 76, left hemisphere
154.1
Dorsolateral tegmental area nTPM: 169.5
2654
Male, age 80, both hemispheres
197.5
2751
Female, age 85, both hemispheres
180.3
2337
Male, age 61, both hemispheres
167.4
2141
Male, age 76, both hemispheres
152.3
2360
Male, age 74, both hemispheres
150.1
Kolliker-Fuse nucleus nTPM: 197.6
2793
Female, age 91, left hemisphere
235.2
2163
Male, age 80, both hemispheres
222.2
2315
Male, age 76, right hemisphere
135.3
Lateral lemniscal nuclei nTPM: 244.8
2169
Male, age 76, both hemispheres
301.5
2453
Male, age 74, right hemisphere
256.5
2746
Female, age 85, left hemisphere
232.3
2320
Female, age 91, left hemisphere
219.4
2036
Male, age 80, both hemispheres
214.0
Lateral parabrachial nucleus nTPM: 198.8
2139
Female, age 85, right hemisphere
257.2
2013
Male, age 80, both hemispheres
194.2
2790
Male, age 61, both hemispheres
184.5
2792
Male, age 76, both hemispheres
159.2
Lateral vestibular nucleus nTPM: 203.5
2184
Male, age 76, both hemispheres
236.7
2311
Male, age 80, both hemispheres
170.3
Locus coeruleus nTPM: 206.0
2123
Female, age 91, both hemispheres
239.1
2720
Male, age 74, both hemispheres
235.3
2014
Male, age 55, unknown
228.3
2317
Female, age 72, unknown
194.4
1980
Male, age 76, both hemispheres
183.2
2162
Male, age 80, both hemispheres
181.2
2788
Male, age 74, unknown
180.2
Medial parabrachial nucleus nTPM: 191.1
2854
Male, age 80, both hemispheres
202.8
2156
Male, age 61, both hemispheres
202.0
2170
Female, age 91, both hemispheres
194.2
2786
Male, age 76, both hemispheres
179.4
2463
Female, age 85, right hemisphere
177.2
Medial periolivary nuclei nTPM: 237.5
2063
Male, age 76, both hemispheres
295.4
2171
Female, age 85, both hemispheres
293.3
2791
Male, age 74, right hemisphere
204.3
2081
Male, age 80, both hemispheres
198.8
2458
Female, age 91, both hemispheres
195.7
Motor facial nucleus nTPM: 243.0
2062
Male, age 76, both hemispheres
305.9
2327
Male, age 80, both hemispheres
247.5
2365
Male, age 74, right hemisphere
244.9
2697
Female, age 85, both hemispheres
238.4
2126
Male, age 61, both hemispheres
216.6
2795
Female, age 91, both hemispheres
204.6
Motor trigeminal nucleus nTPM: 204.1
2079
Male, age 80, both hemispheres
247.3
2560
Male, age 74, both hemispheres
224.2
2321
Female, age 91, both hemispheres
188.8
2309
Male, age 76, both hemispheres
183.3
2335
Male, age 61, both hemispheres
177.1
Nuclei of the trapezoid body nTPM: 257.3
2159
Male, age 61, both hemispheres
304.3
2735
Female, age 85, both hemispheres
277.7
1983
Male, age 76, both hemispheres
271.2
2166
Male, age 80, both hemispheres
225.3
2368
Female, age 91, both hemispheres
207.8
Nucleus raphe magnus nTPM: 264.2
2160
Male, age 61, both hemispheres
328.0
2172
Female, age 85, both hemispheres
312.0
2455
Male, age 74, both hemispheres
263.4
2328
Male, age 80, both hemispheres
242.6
2051
Male, age 76, both hemispheres
224.8
2459
Female, age 91, both hemispheres
214.7
Paramedian reticular nucleus nTPM: 199.2
2050
Female, age 85, both hemispheres
242.1
2057
Male, age 80, both hemispheres
203.9
2313
Male, age 61, both hemispheres
198.7
2052
Male, age 76, both hemispheres
152.0
Pedunculopontine tegmental nucleus nTPM: 177.0
2338
Male, age 61, both hemispheres
183.8
2334
Male, age 80, both hemispheres
183.2
1921
Female, age 85, both hemispheres
164.0
Pontine nuclei nTPM: 269.0
2787
Female, age 85, both hemispheres
345.3
1863
Male, age 55, unknown
315.2
2727
Male, age 61, right hemisphere
288.5
1968
Male, age 76, left hemisphere
286.3
2109
Female, age 72, unknown
262.1
2454
Male, age 74, left hemisphere
241.5
2115
Male, age 80, left hemisphere
217.0
2319
Female, age 91, both hemispheres
195.8
Pontine raphe nucleus nTPM: 207.1
2122
Female, age 85, midline
250.3
2853
Male, age 76, midline
163.8
Posteroventral cochlear nucleus nTPM: 181.3
2752
Female, age 85, both hemispheres
197.1
2070
Male, age 76, both hemispheres
194.1
2135
Female, age 91, both hemispheres
173.6
2341
Male, age 80, both hemispheres
172.3
2371
Male, age 61, both hemispheres
169.5
Principal sensory trigeminal nucleus nTPM: 234.3
2158
Male, age 61, both hemispheres
293.3
2008
Male, age 80, left hemisphere
226.5
2367
Female, age 91, left hemisphere
209.3
2324
Male, age 76, both hemispheres
208.1
Reticular pontine nucleus, caudal nTPM: 229.5
2332
Male, age 80, right hemisphere
255.6
2092
Male, age 76, both hemispheres
251.3
2457
Female, age 91, both hemispheres
213.8
2559
Male, age 74, both hemispheres
197.3
Reticular pontine nucleus, oral nTPM: 208.7
2361
Male, age 74, both hemispheres
254.0
2012
Female, age 85, both hemispheres
222.8
2366
Female, age 91, both hemispheres
213.4
1939
Male, age 80, both hemispheres
180.4
2167
Male, age 76, both hemispheres
173.0
Reticulotegmental nucleus nTPM: 211.8
2452
Male, age 74, both hemispheres
228.7
2325
Male, age 76, both hemispheres
219.7
2333
Male, age 80, both hemispheres
201.1
2322
Female, age 91, both hemispheres
197.8
Spinal trigeminal nucleus, oral nTPM: 198.1
2164
Male, age 80, both hemispheres
220.7
2737
Female, age 85, both hemispheres
194.8
1978
Male, age 76, both hemispheres
178.9
Subcoeruleus area nTPM: 200.6
2089
Male, age 76, left hemisphere
244.2
1958
Male, age 80, both hemispheres
201.2
2323
Female, age 91, left hemisphere
192.0
2451
Male, age 74, both hemispheres
191.1
2369
Female, age 85, left hemisphere
174.5
Superior olive nTPM: 230.5
1875
Female, age 85, both hemispheres
260.6
2020
Male, age 76, both hemispheres
241.6
2329
Male, age 80, right hemisphere
230.0
2561
Female, age 91, both hemispheres
214.6
2364
Male, age 74, right hemisphere
205.8
Ventral periolivary nuclei nTPM: 243.0
2130
Female, age 85, both hemispheres
284.9
2165
Male, age 80, both hemispheres
257.1
2023
Male, age 76, both hemispheres
227.6
2794
Female, age 91, left hemisphere
202.6
Ventrolateral tegmental area, A5 NE cell group nTPM: 216.1
2449
Male, age 74, both hemispheres
249.1
1959
Male, age 76, both hemispheres
243.0
2161
Male, age 80, both hemispheres
216.2
2840
Female, age 85, both hemispheres
214.3
2456
Female, age 91, both hemispheres
199.0
2359
Male, age 61, both hemispheres
175.2
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
143.0
Pig sample
Sample description
nTPM
Pons nTPM: 143.0
Samples: 4
Max nTPM: 163.9
Min nTPM: 119.5
Sample A
Female
163.9
Sample B
Female
119.5
Sample C
Male
136.6
Sample D
Male
152.0
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.