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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
h
m
l
n
Glial cells:
Not detected
Neuronal cells:
Not detected
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
0.9
nTPM
HPA Brain:
187.8
nTPM
GTEx:
0.9
nTPM
FANTOM5:
1.4
Scaled Tags Per Million
HIPPOCAMPUS - Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
Antibody HPA047655
Glial cells
Not detected
Neuronal cells
Not detected
HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM
187.8
Sample id
Sample description
nTPM
Hippocampus nTPM: 159.2
2148
Female, age 91, left hemisphere
188.4
1911
Female, age 85, right hemisphere
182.8
1855
Male, age 76, left hemisphere
172.3
2621
Female, age 67, right hemisphere
153.7
2529
Female, age 94, left hemisphere
130.6
1898
Male, age 80, left hemisphere
127.4
Dentate gyrus nTPM: 156.3
1927
Female, age 91, both hemispheres
183.5
2531
Female, age 67, both hemispheres
181.9
2246
Female, age 85, both hemispheres
159.3
2528
Male, age 74, both hemispheres
149.4
2010
Male, age 76, both hemispheres
143.1
2530
Female, age 94, left hemisphere
120.8
Entorhinal gyrus nTPM: 176.6
2613
Female, age 94, left hemisphere
234.4
2686
Male, age 75, right hemisphere
185.8
1938
Female, age 85, left hemisphere
169.7
2764
Male, age 80, right hemisphere
165.7
1787
Male, age 76, left hemisphere
162.4
2117
Female, age 91, right hemisphere
141.7
Hippocampus, CA1 nTPM: 171.9
2045
Male, age 76, both hemispheres
189.1
1873
Female, age 85, both hemispheres
187.0
2082
Female, age 91, right hemisphere
174.4
2749
Male, age 80, left hemisphere
165.6
2527
Male, age 74, both hemispheres
143.5
Hippocampus, CA2 nTPM: 159.0
2113
Female, age 91, right hemisphere
180.9
1940
Female, age 85, left hemisphere
169.0
2249
Male, age 74, both hemispheres
158.0
1892
Male, age 76, both hemispheres
152.2
1963
Male, age 80, left hemisphere
150.3
2437
Female, age 94, left hemisphere
143.6
Hippocampus, CA3 nTPM: 175.8
2620
Female, age 94, left hemisphere
210.5
2137
Male, age 80, left hemisphere
208.9
2436
Male, age 74, both hemispheres
175.0
1891
Female, age 85, both hemispheres
166.3
2861
Female, age 67, both hemispheres
147.2
1867
Male, age 76, both hemispheres
146.8
Parahippocampal cortex nTPM: 182.2
2693
Female, age 94, both hemispheres
225.8
2622
Female, age 67, right hemisphere
207.2
1850
Male, age 80, both hemispheres
194.2
1933
Female, age 85, both hemispheres
193.6
2250
Female, age 67, right hemisphere
179.7
2532
Female, age 72, left hemisphere
175.9
2245
Female, age 91, both hemispheres
171.3
2692
Male, age 74, both hemispheres
169.9
1990
Female, age 91, right hemisphere
155.6
2018
Male, age 76, both hemispheres
148.9
Perirhinal gyrus nTPM: 187.8
2848
Male, age 76, right hemisphere
207.4
1841
Female, age 85, right hemisphere
204.7
2521
Female, age 94, right hemisphere
184.2
1847
Female, age 91, left hemisphere
176.4
1794
Male, age 80, right hemisphere
166.2
Subiculum nTPM: 162.7
2438
Female, age 94, left hemisphere
177.1
2729
Female, age 91, right hemisphere
170.1
1901
Male, age 80, both hemispheres
166.6
1977
Female, age 85, both hemispheres
164.0
2619
Male, age 74, both hemispheres
150.0
2042
Male, age 76, both hemispheres
148.1
HIPPOCAMPAL FORMATION - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
0.9
GTEx sample id
Sample description
nTPM
Brain - Hippocampus Average nTPM: 0.9
Samples: 197
Max nTPM: 3.9
Min nTPM: 0.0
Std nTPM: 0.7
Median nTPM: 0.8
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
3.9
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
3.0
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
2.8
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
2.7
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
2.5
GTEX-1GF9W-0011-R1a-SM-9QEIQ
60-69 years, male
2.5
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y
40-49 years, male
2.5
GTEX-1HSMO-0011-R1a-SM-CM2SV
60-69 years, male
2.5
GTEX-1F75A-0011-R1b-SM-CE6RA
50-59 years, male
2.4
GTEX-1ICLZ-0011-R1b-SM-A9SM3
60-69 years, male
2.4
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
2.3
GTEX-1GF9V-0011-R1a-SM-CKZNQ
60-69 years, male
2.2
GTEX-14PN4-0011-R1b-SM-69LP8
50-59 years, male
2.1
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
2.1
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
2.1
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
2.0
GTEX-14ABY-0011-R1a-SM-6EU2W
50-59 years, male
2.0
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
2.0
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
2.0
GTEX-RNOR-0011-R1A-SM-CNNP5
50-59 years, female
2.0
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
1.9
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
1.9
GTEX-1F48J-0011-R1a-SM-9QEIC
50-59 years, female
1.8
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
1.7
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
1.7
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
1.7
GTEX-11DXW-0011-R1a-SM-DNZZD
40-49 years, male
1.7
GTEX-1EWIQ-0011-R1a-SM-9OSX7
70-79 years, female
1.7
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
1.6
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
1.6
GTEX-14BIM-0011-R1a-SM-69LQI
60-69 years, female
1.6
GTEX-16YQH-0011-R1a-SM-7LT8R
30-39 years, male
1.6
GTEX-1HBPI-0011-R1b-SM-A9SKF
50-59 years, male
1.6
GTEX-1J1OQ-0011-R1a-SM-A9G1Z
40-49 years, female
1.6
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
1.5
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
1.5
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
1.5
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
1.5
GTEX-ZDXO-0011-R1a-SM-4WKF4
60-69 years, male
1.5
GTEX-1CB4G-0011-R1b-SM-9QEHT
60-69 years, male
1.5
GTEX-1IDJH-0011-R1b-SM-ARU6U
70-79 years, male
1.5
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
1.4
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
1.4
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
1.4
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
1.4
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
1.4
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
1.4
GTEX-13NZ8-0011-R1b-SM-5KM3V
60-69 years, female
1.3
GTEX-P44G-0011-R1A-SM-2I3FE
30-39 years, male
1.3
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
1.3
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
1.3
GTEX-11GSP-0011-R1a-SM-9QEJ3
60-69 years, female
1.3
GTEX-1H1CY-0011-R1a-SM-CKZOZ
60-69 years, female
1.3
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
1.2
GTEX-16XZZ-0011-R1a-SM-7LTAH
60-69 years, male
1.2
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
1.2
GTEX-11GS4-0011-R1a-SM-DO129
60-69 years, male
1.2
GTEX-1A8G6-0011-R1a-SM-7P8PC
60-69 years, male
1.2
GTEX-1C6VR-0011-R1a-SM-7MXUE
60-69 years, male
1.2
GTEX-1EMGI-0011-R1b-SM-9OSWZ
60-69 years, male
1.2
GTEX-1H1ZS-0011-R1b-SM-A9G1E
70-79 years, male
1.2
GTEX-1IKK5-0011-R1b-SM-CE6SQ
60-69 years, male
1.2
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
1.1
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
1.1
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
1.1
GTEX-11EI6-0011-R1a-SM-DO93L
60-69 years, male
1.1
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
1.0
GTEX-15ER7-0011-R1b-SM-7KUE1
20-29 years, female
1.0
GTEX-16Z82-0011-R1b-SM-7EPHZ
60-69 years, male
1.0
GTEX-17HHY-0011-R1a-SM-7189V
50-59 years, male
1.0
GTEX-18A6Q-0011-R1b-SM-731DI
60-69 years, male
1.0
GTEX-1EKGG-0011-R1b-SM-9QEI1
60-69 years, male
1.0
GTEX-1H3O1-0011-R1b-SM-CL554
60-69 years, male
1.0
GTEX-1I1GS-0011-R1a-SM-CJI43
60-69 years, male
1.0
GTEX-1I1HK-0011-R1b-SM-CM2T7
60-69 years, male
1.0
GTEX-1LB8K-0011-R1b-SM-EZ6MV
50-59 years, male
1.0
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
0.9
GTEX-17JCI-0011-R1b-SM-718A3
60-69 years, female
0.9
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
0.9
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
0.9
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
0.9
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
0.9
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
0.9
GTEX-11WQC-0011-R1b-SM-DO932
60-69 years, male
0.9
GTEX-1B996-0011-R1b-SM-7P8PO
60-69 years, male
0.9
GTEX-1GTWX-0011-R1a-SM-CE6RL
60-69 years, male
0.9
GTEX-1H1DG-0011-R1b-SM-CKZP1
70-79 years, male
0.9
GTEX-1IY9M-0011-R1a-SM-EXURZ
60-69 years, male
0.9
GTEX-1J8Q2-0011-R1a-SM-D4P2D
60-69 years, male
0.9
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
0.8
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
0.8
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
0.8
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
0.8
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
0.8
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
0.8
GTEX-14JIY-0011-R1a-SM-68713
60-69 years, male
0.8
GTEX-14PJO-0011-R1b-SM-6AJAK
60-69 years, male
0.8
GTEX-14PQA-0011-R1b-SM-6EU1G
50-59 years, female
0.8
GTEX-17EVP-0011-R1a-SM-7DHLA
40-49 years, male
0.8
GTEX-17F97-0011-R1b-SM-7IGM9
50-59 years, male
0.8
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
0.8
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
0.8
GTEX-1A3MX-0011-R1b-SM-7P8PH
60-69 years, male
0.8
GTEX-1AX9I-0011-R1b-SM-7RHG2
60-69 years, male
0.8
GTEX-1B8L1-0011-R1a-SM-7P8SS
60-69 years, male
0.8
GTEX-1B8SF-0011-R1b-SM-7P8Q8
60-69 years, male
0.8
GTEX-1I1GQ-0011-R1a-SM-CY8GG
50-59 years, male
0.8
GTEX-1IOXB-0011-R1a-SM-D4P27
50-59 years, male
0.8
GTEX-1LG7Y-0011-R1a-SM-EYYWV
50-59 years, male
0.8
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
0.7
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
0.7
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
0.7
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
0.7
GTEX-17MF6-0011-R1a-SM-72D6O
40-49 years, male
0.7
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
0.7
GTEX-1B933-0011-R1b-SM-9QEGW
50-59 years, female
0.7
GTEX-1EX96-0011-R1a-SM-CE6R5
50-59 years, male
0.7
GTEX-1GN73-0011-R1a-SM-CKZNT
60-69 years, male
0.7
GTEX-1H3VE-0011-R1a-SM-A9G1K
40-49 years, male
0.7
GTEX-1HGF4-0011-R1a-SM-CJI3S
60-69 years, male
0.7
GTEX-1HR98-0011-R1a-SM-ARZLQ
60-69 years, male
0.7
GTEX-N7MT-0011-R1a-SM-CNPO1
60-69 years, female
0.7
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
0.6
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
0.6
GTEX-14E6D-0011-R1b-SM-5YYAW
50-59 years, male
0.6
GTEX-14LZ3-0011-R1a-SM-69LP5
60-69 years, female
0.6
GTEX-14PJM-0011-R1a-SM-CNPO3
50-59 years, female
0.6
GTEX-15CHQ-0011-R1a-SM-COH27
60-69 years, male
0.6
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
0.5
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
0.5
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
0.5
GTEX-17EVQ-0011-R1a-SM-7189S
70-79 years, male
0.5
GTEX-17HG3-0011-R1a-SM-7LG6H
30-39 years, female
0.5
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
0.5
GTEX-1GZHY-0011-R1a-SM-CE6RR
50-59 years, female
0.5
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
0.4
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
0.4
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
0.4
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
0.4
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
0.4
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
0.4
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
0.4
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
0.4
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
0.4
GTEX-14C5O-0011-R1b-SM-6AJBW
60-69 years, male
0.4
GTEX-14E7W-0011-R1b-SM-5YYAT
70-79 years, male
0.4
GTEX-16GPK-0011-R1b-SM-7EWDH
60-69 years, male
0.4
GTEX-183WM-0011-R1a-SM-718A8
70-79 years, female
0.4
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
0.4
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
0.4
GTEX-11TUW-0011-R1a-SM-DO92S
60-69 years, male
0.4
GTEX-1C64N-0011-R1b-SM-7P8Q7
50-59 years, male
0.4
GTEX-1F6I4-0011-R1a-SM-9OSWU
60-69 years, male
0.4
GTEX-1F6IF-0011-R1b-SM-9WG78
60-69 years, male
0.4
GTEX-1GMR8-0011-R1b-SM-CJI2O
50-59 years, female
0.4
GTEX-1GN2E-0011-R1b-SM-CE6RJ
60-69 years, male
0.4
GTEX-1HSKV-0011-R1b-SM-CMKH7
60-69 years, male
0.4
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
0.3
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
0.3
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
0.3
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
0.3
GTEX-15UF6-0011-R1a-SM-9QEGH
70-79 years, female
0.3
GTEX-16NPV-0011-R1b-SM-7MGVZ
50-59 years, female
0.3
GTEX-1CB4J-0011-R1a-SM-9WG64
60-69 years, male
0.3
GTEX-1I1GV-0011-R1a-SM-CL559
60-69 years, male
0.3
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
0.2
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
0.2
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
0.2
GTEX-OHPN-0011-R1A-SM-2I5GB
60-69 years, female
0.2
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
0.2
GTEX-1BAJH-0011-R1a-SM-7P8SV
70-79 years, male
0.2
GTEX-1E1VI-0011-R1a-SM-ARZMM
50-59 years, male
0.2
GTEX-1H23P-0011-R1a-SM-ACKVC
60-69 years, male
0.2
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
0.1
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
0.1
GTEX-14LLW-0011-R1a-SM-5ZZVD
70-79 years, female
0.1
GTEX-X4EP-0011-R1A-SM-3P624
60-69 years, female
0.1
GTEX-1GN1U-0011-R1a-SM-CJI25
50-59 years, female
0.1
GTEX-1HT8W-0011-R1b-SM-CJI3V
30-39 years, male
0.1
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
0.0
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
0.0
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
0.0
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
0.0
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
0.0
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
0.0
GTEX-15DCD-0011-R1b-SM-6LPIJ
70-79 years, female
0.0
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
0.0
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
0.0
GTEX-17HII-0011-R1b-SM-7MGVW
50-59 years, male
0.0
GTEX-1A32A-0011-R1a-SM-7P8SQ
50-59 years, female
0.0
GTEX-1C6VQ-0011-R1a-SM-7P8Q2
50-59 years, male
0.0
GTEX-1CAV2-0011-R1a-SM-ARZML
40-49 years, female
0.0
GTEX-1E2YA-0011-R1b-SM-CJI29
50-59 years, male
0.0
GTEX-1EH9U-0011-R1b-SM-CJI2B
60-69 years, male
0.0
GTEX-1F75W-0011-R1a-SM-ARU81
60-69 years, male
0.0
GTEX-1H3NZ-0011-R1a-SM-CKZP5
60-69 years, male
0.0
GTEX-1H4P4-0011-R1b-SM-CL54V
50-59 years, male
0.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.