HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:33.4 nTPM
HPA Brain:30.0 nTPM
GTEx:33.4 nTPM
FANTOM5:10.2 Scaled Tags Per Million
Pig:18.4 nTPM
Mouse:12.6 nTPM
Allen mouse:0.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA066721
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 30.0
Sample id Sample description nTPM
Hippocampus
nTPM: 26.1
2148 Female, age 91, left hemisphere 31.1
1898 Male, age 80, left hemisphere 28.7
2621 Female, age 67, right hemisphere 25.9
1911 Female, age 85, right hemisphere 25.2
2529 Female, age 94, left hemisphere 23.1
1855 Male, age 76, left hemisphere 22.4
Dentate gyrus
nTPM: 28.0
2531 Female, age 67, both hemispheres 37.9
1927 Female, age 91, both hemispheres 29.7
2530 Female, age 94, left hemisphere 29.0
2528 Male, age 74, both hemispheres 26.9
2010 Male, age 76, both hemispheres 22.4
2246 Female, age 85, both hemispheres 22.0
Entorhinal gyrus
nTPM: 28.1
2764 Male, age 80, right hemisphere 32.9
1787 Male, age 76, left hemisphere 31.8
2613 Female, age 94, left hemisphere 30.4
2686 Male, age 75, right hemisphere 29.1
1938 Female, age 85, left hemisphere 27.1
2117 Female, age 91, right hemisphere 17.4
Hippocampus, CA1
nTPM: 29.0
2749 Male, age 80, left hemisphere 38.3
2045 Male, age 76, both hemispheres 28.4
2082 Female, age 91, right hemisphere 28.1
2527 Male, age 74, both hemispheres 26.1
1873 Female, age 85, both hemispheres 24.4
Hippocampus, CA2
nTPM: 24.6
1892 Male, age 76, both hemispheres 28.5
2437 Female, age 94, left hemisphere 26.2
2113 Female, age 91, right hemisphere 24.9
2249 Male, age 74, both hemispheres 23.6
1963 Male, age 80, left hemisphere 23.1
1940 Female, age 85, left hemisphere 21.3
Hippocampus, CA3
nTPM: 30.0
2620 Female, age 94, left hemisphere 38.8
2861 Female, age 67, both hemispheres 37.8
2137 Male, age 80, left hemisphere 36.4
1867 Male, age 76, both hemispheres 25.6
1891 Female, age 85, both hemispheres 22.2
2436 Male, age 74, both hemispheres 19.4
Parahippocampal cortex
nTPM: 26.7
1990 Female, age 91, right hemisphere 31.5
2245 Female, age 91, both hemispheres 30.0
2250 Female, age 67, right hemisphere 28.8
2622 Female, age 67, right hemisphere 28.1
2693 Female, age 94, both hemispheres 27.9
1933 Female, age 85, both hemispheres 26.0
1850 Male, age 80, both hemispheres 25.4
2018 Male, age 76, both hemispheres 25.3
2532 Female, age 72, left hemisphere 22.5
2692 Male, age 74, both hemispheres 21.3
Perirhinal gyrus
nTPM: 26.5
1847 Female, age 91, left hemisphere 29.8
1794 Male, age 80, right hemisphere 27.6
2521 Female, age 94, right hemisphere 25.8
2848 Male, age 76, right hemisphere 25.1
1841 Female, age 85, right hemisphere 24.4
Subiculum
nTPM: 23.6
1901 Male, age 80, both hemispheres 26.9
1977 Female, age 85, both hemispheres 26.4
2729 Female, age 91, right hemisphere 24.3
2619 Male, age 74, both hemispheres 22.6
2042 Male, age 76, both hemispheres 22.2
2438 Female, age 94, left hemisphere 18.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 33.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 33.4
Samples: 197

Max nTPM: 86.8
Min nTPM: 6.0
Std nTPM: 14.7
Median nTPM: 33.2
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 86.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 75.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 74.1
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 70.9
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 69.2
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 66.7
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 60.1
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 59.3
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 58.5
GTEX-12WSD-0011-R1b-SM-5LZVY 60-69 years, female 58.2
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 57.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 10.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 10.2
FF:10153-102I9 76 years, female 11.2
FF:10169-103B7 60 years, female 9.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 18.4
Pig sample Sample description nTPM
Subiculum
nTPM: 13.3
Samples: 4

Max nTPM: 19.7
Min nTPM: 10.0
Sample A Female 19.7
Sample B Female 11.8
Sample C Male 11.6
Sample D Male 10.0
Dorsal hippocampus
nTPM: 16.0
Samples: 4

Max nTPM: 19.2
Min nTPM: 12.1
Sample A Female 19.2
Sample B Female 15.5
Sample C Male 17.2
Sample D Male 12.1
Entorhinal cortex
nTPM: 18.4
Samples: 4

Max nTPM: 22.1
Min nTPM: 14.8
Sample A Female 15.0
Sample B Female 22.1
Sample C Male 21.7
Sample D Male 14.8
Ventral hippocampus
nTPM: 14.4
Samples: 4

Max nTPM: 18.1
Min nTPM: 11.0
Sample A Female 12.0
Sample B Female 11.0
Sample C Male 18.1
Sample D Male 16.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 12.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 12.7
Samples: 4

Max nTPM: 16.8
Min nTPM: 9.3
Sample A Male 13.8
Sample B Male 16.8
Sample C Female 9.3
Sample D Female 10.7
Hippocampal formation
nTPM: 8.4
Samples: 4

Max nTPM: 9.9
Min nTPM: 6.8
Sample A Male 6.8
Sample B Male 9.9
Sample C Female 8.4
Sample D Female 8.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.4
75990890 Antisense, RP_060608_01_G06, Mouse strain C57BL/6J (56 days, male) 0.4

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