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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
2557.6
nTPM
FANTOM5:
33.1
Scaled Tags Per Million
Pig:
1944.2
nTPM
PONS - HPA Brain RNA-seq
Max nTPM
2557.6
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 2380.9
2090
Male, age 80, both hemispheres
2848.2
2188
Female, age 91, both hemispheres
2748.7
2301
Female, age 85, both hemispheres
2446.4
1984
Male, age 76, both hemispheres
1480.4
Dorsal cochlear nucleus nTPM: 2414.1
2802
Male, age 74, right hemisphere
2954.1
2187
Female, age 91, both hemispheres
2594.6
2378
Male, age 80, both hemispheres
2379.5
2370
Male, age 61, both hemispheres
2256.2
2058
Male, age 76, both hemispheres
1886.2
Dorsal tegmental nucleus nTPM: 2172.3
2358
Male, age 61, both hemispheres
2597.1
2326
Male, age 74, both hemispheres
2380.3
2083
Male, age 80, both hemispheres
2127.3
1936
Male, age 76, left hemisphere
1584.4
Dorsolateral tegmental area nTPM: 2251.9
2337
Male, age 61, both hemispheres
3544.2
2654
Male, age 80, both hemispheres
2391.4
2751
Female, age 85, both hemispheres
2236.3
2360
Male, age 74, both hemispheres
1931.1
2141
Male, age 76, both hemispheres
1156.4
Kolliker-Fuse nucleus nTPM: 2050.7
2793
Female, age 91, left hemisphere
2375.4
2163
Male, age 80, both hemispheres
2165.1
2315
Male, age 76, right hemisphere
1611.5
Lateral lemniscal nuclei nTPM: 1637.5
2453
Male, age 74, right hemisphere
2020.5
2746
Female, age 85, left hemisphere
1870.7
2320
Female, age 91, left hemisphere
1622.3
2036
Male, age 80, both hemispheres
1401.8
2169
Male, age 76, both hemispheres
1272.2
Lateral parabrachial nucleus nTPM: 1919.8
2792
Male, age 76, both hemispheres
2249.5
2013
Male, age 80, both hemispheres
2218.1
2790
Male, age 61, both hemispheres
1779.4
2139
Female, age 85, right hemisphere
1432.2
Lateral vestibular nucleus nTPM: 2154.0
2311
Male, age 80, both hemispheres
2481.7
2184
Male, age 76, both hemispheres
1826.3
Locus coeruleus nTPM: 1435.4
2720
Male, age 74, both hemispheres
1817.8
2014
Male, age 55, unknown
1618.6
2123
Female, age 91, both hemispheres
1544.0
2162
Male, age 80, both hemispheres
1467.7
1980
Male, age 76, both hemispheres
1323.4
2317
Female, age 72, unknown
1302.4
2788
Male, age 74, unknown
974.2
Medial parabrachial nucleus nTPM: 2084.2
2170
Female, age 91, both hemispheres
3019.8
2854
Male, age 80, both hemispheres
2291.6
2463
Female, age 85, right hemisphere
2078.5
2156
Male, age 61, both hemispheres
1519.2
2786
Male, age 76, both hemispheres
1511.9
Medial periolivary nuclei nTPM: 1941.0
2081
Male, age 80, both hemispheres
2430.3
2458
Female, age 91, both hemispheres
2326.3
2791
Male, age 74, right hemisphere
1858.3
2063
Male, age 76, both hemispheres
1647.2
2171
Female, age 85, both hemispheres
1442.9
Motor facial nucleus nTPM: 1854.8
2126
Male, age 61, both hemispheres
2319.3
2697
Female, age 85, both hemispheres
2096.0
2795
Female, age 91, both hemispheres
2080.2
2365
Male, age 74, right hemisphere
1959.2
2062
Male, age 76, both hemispheres
1380.7
2327
Male, age 80, both hemispheres
1293.3
Motor trigeminal nucleus nTPM: 2038.9
2321
Female, age 91, both hemispheres
2638.8
2560
Male, age 74, both hemispheres
2215.0
2335
Male, age 61, both hemispheres
2148.1
2079
Male, age 80, both hemispheres
1603.2
2309
Male, age 76, both hemispheres
1589.6
Nuclei of the trapezoid body nTPM: 1719.6
2166
Male, age 80, both hemispheres
2178.7
2368
Female, age 91, both hemispheres
1861.3
1983
Male, age 76, both hemispheres
1732.0
2159
Male, age 61, both hemispheres
1532.4
2735
Female, age 85, both hemispheres
1293.9
Nucleus raphe magnus nTPM: 1600.6
2459
Female, age 91, both hemispheres
1987.7
2051
Male, age 76, both hemispheres
1852.0
2455
Male, age 74, both hemispheres
1692.2
2328
Male, age 80, both hemispheres
1553.0
2160
Male, age 61, both hemispheres
1295.8
2172
Female, age 85, both hemispheres
1223.1
Paramedian reticular nucleus nTPM: 2089.2
2052
Male, age 76, both hemispheres
2373.5
2057
Male, age 80, both hemispheres
2101.1
2050
Female, age 85, both hemispheres
1966.1
2313
Male, age 61, both hemispheres
1916.3
Pedunculopontine tegmental nucleus nTPM: 1952.9
2338
Male, age 61, both hemispheres
2798.9
2334
Male, age 80, both hemispheres
1782.1
1921
Female, age 85, both hemispheres
1277.9
Pontine nuclei nTPM: 1840.7
2319
Female, age 91, both hemispheres
2562.7
2115
Male, age 80, left hemisphere
2289.5
2454
Male, age 74, left hemisphere
2174.3
2109
Female, age 72, unknown
2062.9
1968
Male, age 76, left hemisphere
1598.5
1863
Male, age 55, unknown
1452.8
2727
Male, age 61, right hemisphere
1359.5
2787
Female, age 85, both hemispheres
1225.3
Pontine raphe nucleus nTPM: 1350.2
2122
Female, age 85, midline
1374.7
2853
Male, age 76, midline
1325.6
Posteroventral cochlear nucleus nTPM: 2557.6
2341
Male, age 80, both hemispheres
3250.4
2135
Female, age 91, both hemispheres
3188.1
2371
Male, age 61, both hemispheres
2600.6
2070
Male, age 76, both hemispheres
1884.7
2752
Female, age 85, both hemispheres
1864.0
Principal sensory trigeminal nucleus nTPM: 1779.5
2367
Female, age 91, left hemisphere
2274.3
2324
Male, age 76, both hemispheres
1848.8
2158
Male, age 61, both hemispheres
1553.0
2008
Male, age 80, left hemisphere
1441.9
Reticular pontine nucleus, caudal nTPM: 1855.8
2559
Male, age 74, both hemispheres
2604.4
2457
Female, age 91, both hemispheres
2004.6
2092
Male, age 76, both hemispheres
1585.0
2332
Male, age 80, right hemisphere
1229.2
Reticular pontine nucleus, oral nTPM: 1886.0
2361
Male, age 74, both hemispheres
2381.0
1939
Male, age 80, both hemispheres
1926.2
2366
Female, age 91, both hemispheres
1913.1
2012
Female, age 85, both hemispheres
1667.9
2167
Male, age 76, both hemispheres
1541.6
Reticulotegmental nucleus nTPM: 1925.6
2452
Male, age 74, both hemispheres
2338.0
2322
Female, age 91, both hemispheres
2220.2
2333
Male, age 80, both hemispheres
1795.8
2325
Male, age 76, both hemispheres
1348.2
Spinal trigeminal nucleus, oral nTPM: 1787.1
2164
Male, age 80, both hemispheres
2126.1
2737
Female, age 85, both hemispheres
1717.0
1978
Male, age 76, both hemispheres
1518.2
Subcoeruleus area nTPM: 1772.3
2369
Female, age 85, left hemisphere
2410.9
2451
Male, age 74, both hemispheres
2018.3
1958
Male, age 80, both hemispheres
1779.9
2323
Female, age 91, left hemisphere
1348.6
2089
Male, age 76, left hemisphere
1303.7
Superior olive nTPM: 1832.9
2561
Female, age 91, both hemispheres
2248.8
2364
Male, age 74, right hemisphere
1963.8
2020
Male, age 76, both hemispheres
1873.0
2329
Male, age 80, right hemisphere
1654.6
1875
Female, age 85, both hemispheres
1424.2
Ventral periolivary nuclei nTPM: 1714.7
2794
Female, age 91, left hemisphere
2084.8
2023
Male, age 76, both hemispheres
1991.1
2165
Male, age 80, both hemispheres
1713.2
2130
Female, age 85, both hemispheres
1069.8
Ventrolateral tegmental area, A5 NE cell group nTPM: 1908.2
2359
Male, age 61, both hemispheres
2240.1
2456
Female, age 91, both hemispheres
2137.1
2840
Female, age 85, both hemispheres
1970.4
2161
Male, age 80, both hemispheres
1931.7
2449
Male, age 74, both hemispheres
1726.8
1959
Male, age 76, both hemispheres
1443.0
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
