HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:72.1 nTPM
HPA Brain:20.4 nTPM
GTEx:72.1 nTPM
FANTOM5:66.3 Scaled Tags Per Million
Pig:21.3 nTPM
Mouse:228.8 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 20.4
Sample id Sample description nTPM
Hippocampus
nTPM: 18.9
1898 Male, age 80, left hemisphere 22.8
2529 Female, age 94, left hemisphere 20.6
1855 Male, age 76, left hemisphere 18.8
1911 Female, age 85, right hemisphere 18.7
2621 Female, age 67, right hemisphere 18.2
2148 Female, age 91, left hemisphere 14.6
Dentate gyrus
nTPM: 18.0
2010 Male, age 76, both hemispheres 22.6
2528 Male, age 74, both hemispheres 20.5
2530 Female, age 94, left hemisphere 18.9
2246 Female, age 85, both hemispheres 16.7
1927 Female, age 91, both hemispheres 15.6
2531 Female, age 67, both hemispheres 13.4
Entorhinal gyrus
nTPM: 18.5
2117 Female, age 91, right hemisphere 20.9
2764 Male, age 80, right hemisphere 19.5
2686 Male, age 75, right hemisphere 19.0
1787 Male, age 76, left hemisphere 18.8
1938 Female, age 85, left hemisphere 18.2
2613 Female, age 94, left hemisphere 14.7
Hippocampus, CA1
nTPM: 19.4
1873 Female, age 85, both hemispheres 23.3
2749 Male, age 80, left hemisphere 22.2
2082 Female, age 91, right hemisphere 18.4
2527 Male, age 74, both hemispheres 17.1
2045 Male, age 76, both hemispheres 16.3
Hippocampus, CA2
nTPM: 20.4
1963 Male, age 80, left hemisphere 25.0
2249 Male, age 74, both hemispheres 24.7
2113 Female, age 91, right hemisphere 19.7
2437 Female, age 94, left hemisphere 19.0
1892 Male, age 76, both hemispheres 17.3
1940 Female, age 85, left hemisphere 17.0
Hippocampus, CA3
nTPM: 17.2
1891 Female, age 85, both hemispheres 20.3
2436 Male, age 74, both hemispheres 19.9
1867 Male, age 76, both hemispheres 18.9
2137 Male, age 80, left hemisphere 16.4
2861 Female, age 67, both hemispheres 13.8
2620 Female, age 94, left hemisphere 13.6
Parahippocampal cortex
nTPM: 17.0
2018 Male, age 76, both hemispheres 21.0
1933 Female, age 85, both hemispheres 19.7
1990 Female, age 91, right hemisphere 18.8
2245 Female, age 91, both hemispheres 17.7
1850 Male, age 80, both hemispheres 17.3
2250 Female, age 67, right hemisphere 17.3
2692 Male, age 74, both hemispheres 17.3
2693 Female, age 94, both hemispheres 14.1
2532 Female, age 72, left hemisphere 13.6
2622 Female, age 67, right hemisphere 13.2
Perirhinal gyrus
nTPM: 17.8
1847 Female, age 91, left hemisphere 20.4
1794 Male, age 80, right hemisphere 19.6
1841 Female, age 85, right hemisphere 19.2
2521 Female, age 94, right hemisphere 15.0
2848 Male, age 76, right hemisphere 14.9
Subiculum
nTPM: 20.1
2042 Male, age 76, both hemispheres 28.5
1977 Female, age 85, both hemispheres 21.6
1901 Male, age 80, both hemispheres 21.3
2619 Male, age 74, both hemispheres 19.6
2729 Female, age 91, right hemisphere 18.8
2438 Female, age 94, left hemisphere 11.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 72.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 72.1
Samples: 197

Max nTPM: 203.2
Min nTPM: 35.5
Std nTPM: 21.5
Median nTPM: 68.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 203.2
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 147.8
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 129.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 127.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 120.0
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 119.2
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 118.0
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 117.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 116.4
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 113.0
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 112.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 66.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 66.3
FF:10169-103B7 60 years, female 78.9
FF:10153-102I9 76 years, female 53.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 21.3
Pig sample Sample description nTPM
Subiculum
nTPM: 20.2
Samples: 4

Max nTPM: 22.7
Min nTPM: 17.7
Sample A Female 22.7
Sample B Female 17.7
Sample C Male 22.5
Sample D Male 17.7
Dorsal hippocampus
nTPM: 21.3
Samples: 4

Max nTPM: 26.5
Min nTPM: 15.1
Sample A Female 23.6
Sample B Female 19.9
Sample C Male 26.5
Sample D Male 15.1
Entorhinal cortex
nTPM: 17.8
Samples: 4

Max nTPM: 19.8
Min nTPM: 16.3
Sample A Female 16.9
Sample B Female 18.3
Sample C Male 19.8
Sample D Male 16.3
Ventral hippocampus
nTPM: 19.7
Samples: 4

Max nTPM: 22.9
Min nTPM: 15.0
Sample A Female 19.7
Sample B Female 21.2
Sample C Male 22.9
Sample D Male 15.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 228.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 215.5
Samples: 4

Max nTPM: 239.1
Min nTPM: 198.7
Sample A Male 203.4
Sample B Male 220.9
Sample C Female 239.1
Sample D Female 198.7
Hippocampal formation
nTPM: 228.8
Samples: 4

Max nTPM: 272.8
Min nTPM: 196.5
Sample A Male 272.8
Sample B Male 196.5
Sample C Female 214.7
Sample D Female 231.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
69407110 Antisense, RP_050412_02_H08, Mouse strain C57BL/6J (56 days, male) 0.1

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