HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni
Consensus:107.3 nTPM
HPA Brain:164.6 nTPM
GTEx:107.3 nTPM
FANTOM5:9.9 Scaled Tags Per Million
Pig:96.5 nTPM
Mouse:95.5 nTPM
Allen mouse:1.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA044014
Glial cells Not detected
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 164.6
Sample id Sample description nTPM
Hippocampus
nTPM: 141.7
2621 Female, age 67, right hemisphere 174.0
1898 Male, age 80, left hemisphere 155.1
2148 Female, age 91, left hemisphere 151.7
1855 Male, age 76, left hemisphere 145.2
1911 Female, age 85, right hemisphere 115.2
2529 Female, age 94, left hemisphere 109.0
Dentate gyrus
nTPM: 143.8
2530 Female, age 94, left hemisphere 169.8
2531 Female, age 67, both hemispheres 151.1
1927 Female, age 91, both hemispheres 148.7
2246 Female, age 85, both hemispheres 134.5
2010 Male, age 76, both hemispheres 133.7
2528 Male, age 74, both hemispheres 124.9
Entorhinal gyrus
nTPM: 144.1
2764 Male, age 80, right hemisphere 167.4
2613 Female, age 94, left hemisphere 164.1
1787 Male, age 76, left hemisphere 147.2
1938 Female, age 85, left hemisphere 137.5
2686 Male, age 75, right hemisphere 128.8
2117 Female, age 91, right hemisphere 119.9
Hippocampus, CA1
nTPM: 135.0
2749 Male, age 80, left hemisphere 169.6
1873 Female, age 85, both hemispheres 139.9
2045 Male, age 76, both hemispheres 132.5
2527 Male, age 74, both hemispheres 121.3
2082 Female, age 91, right hemisphere 111.5
Hippocampus, CA2
nTPM: 132.7
1963 Male, age 80, left hemisphere 162.3
2437 Female, age 94, left hemisphere 145.9
1892 Male, age 76, both hemispheres 144.8
1940 Female, age 85, left hemisphere 121.2
2113 Female, age 91, right hemisphere 114.9
2249 Male, age 74, both hemispheres 107.0
Hippocampus, CA3
nTPM: 140.1
2861 Female, age 67, both hemispheres 183.6
2620 Female, age 94, left hemisphere 153.3
2137 Male, age 80, left hemisphere 150.0
1867 Male, age 76, both hemispheres 127.4
2436 Male, age 74, both hemispheres 119.1
1891 Female, age 85, both hemispheres 107.3
Parahippocampal cortex
nTPM: 149.8
2532 Female, age 72, left hemisphere 171.2
2622 Female, age 67, right hemisphere 170.8
1933 Female, age 85, both hemispheres 160.5
2245 Female, age 91, both hemispheres 157.0
2250 Female, age 67, right hemisphere 154.8
2693 Female, age 94, both hemispheres 152.9
1850 Male, age 80, both hemispheres 149.4
1990 Female, age 91, right hemisphere 137.6
2692 Male, age 74, both hemispheres 124.6
2018 Male, age 76, both hemispheres 119.0
Perirhinal gyrus
nTPM: 164.6
1847 Female, age 91, left hemisphere 175.1
1794 Male, age 80, right hemisphere 174.1
2521 Female, age 94, right hemisphere 163.3
1841 Female, age 85, right hemisphere 161.7
2848 Male, age 76, right hemisphere 148.9
Subiculum
nTPM: 125.2
1977 Female, age 85, both hemispheres 144.1
2619 Male, age 74, both hemispheres 136.5
2438 Female, age 94, left hemisphere 122.8
1901 Male, age 80, both hemispheres 119.9
2729 Female, age 91, right hemisphere 116.1
2042 Male, age 76, both hemispheres 111.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 107.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 107.3
Samples: 197

Max nTPM: 195.2
Min nTPM: 60.0
Std nTPM: 27.2
Median nTPM: 105.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 195.2
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 175.6
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 173.0
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 169.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 165.8
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 164.6
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 163.3
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 159.0
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 157.2
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 155.5
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 154.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 9.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 9.9
FF:10169-103B7 60 years, female 12.4
FF:10153-102I9 76 years, female 7.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 96.5
Pig sample Sample description nTPM
Subiculum
nTPM: 96.5
Samples: 4

Max nTPM: 123.0
Min nTPM: 80.9
Sample A Female 123.0
Sample B Female 89.2
Sample C Male 93.0
Sample D Male 80.9
Dorsal hippocampus
nTPM: 86.5
Samples: 4

Max nTPM: 99.6
Min nTPM: 75.4
Sample A Female 99.6
Sample B Female 83.2
Sample C Male 87.7
Sample D Male 75.4
Entorhinal cortex
nTPM: 89.0
Samples: 4

Max nTPM: 93.3
Min nTPM: 84.1
Sample A Female 88.0
Sample B Female 90.4
Sample C Male 93.3
Sample D Male 84.1
Ventral hippocampus
nTPM: 89.4
Samples: 4

Max nTPM: 112.9
Min nTPM: 70.4
Sample A Female 91.6
Sample B Female 70.4
Sample C Male 112.9
Sample D Male 82.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 95.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 95.6
Samples: 4

Max nTPM: 99.9
Min nTPM: 92.7
Sample A Male 92.7
Sample B Male 96.4
Sample C Female 93.2
Sample D Female 99.9
Hippocampal formation
nTPM: 90.4
Samples: 4

Max nTPM: 98.0
Min nTPM: 82.4
Sample A Male 98.0
Sample B Male 92.4
Sample C Female 82.4
Sample D Female 88.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.7
68076539 Antisense, RP_040923_02_E12, Mouse strain C57BL/6J (56 days, male) 1.7

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