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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
53.5
nTPM
HPA Brain:
26.1
nTPM
GTEx:
53.5
nTPM
FANTOM5:
41.7
Scaled Tags Per Million
Pig:
12.2
nTPM
Mouse:
21.7
nTPM
Allen mouse:
2.0
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max nTPM
26.1
Sample id
Sample description
nTPM
Amygdala nTPM: 26.1
2517
Female, age 94, left hemisphere
30.1
1987
Female, age 91, left hemisphere
28.3
2695
Female, age 67, right hemisphere
27.7
2514
Male, age 75, right hemisphere
25.8
2814
Male, age 76, right hemisphere
18.4
Basal amygdala nTPM: 21.7
2609
Male, age 75, right hemisphere
30.1
2110
Male, age 80, left hemisphere
25.3
2243
Female, age 91, right hemisphere
22.7
1955
Male, age 76, both hemispheres
20.1
2685
Female, age 94, left hemisphere
17.8
2827
Female, age 67, right hemisphere
14.3
Central amygdala nTPM: 26.0
2515
Male, age 75, right hemisphere
35.1
2826
Female, age 94, left hemisphere
30.4
2701
Female, age 91, right hemisphere
23.0
2239
Male, age 80, left hemisphere
22.5
1905
Male, age 76, both hemispheres
19.2
Corticomedial amygdala nTPM: 23.1
2428
Male, age 75, right hemisphere
28.9
2240
Male, age 76, both hemispheres
24.6
2242
Female, age 91, right hemisphere
23.7
2829
Male, age 80, left hemisphere
22.1
2535
Female, age 67, right hemisphere
21.5
2429
Female, age 94, left hemisphere
17.8
Lateral amygdala nTPM: 25.5
2256
Male, age 80, left hemisphere
30.5
2516
Male, age 75, right hemisphere
29.9
2830
Female, age 67, right hemisphere
27.7
2255
Female, age 91, right hemisphere
25.2
2534
Female, age 94, left hemisphere
21.0
1883
Male, age 76, both hemispheres
18.7
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
53.5
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 53.5
Samples: 152
Max nTPM: 117.8
Min nTPM: 12.3
Std nTPM: 19.7
Median nTPM: 50.4
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
117.8
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
111.7
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
109.4
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
105.9
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
103.8
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
95.5
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
91.1
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
90.5
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
87.5
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
87.5
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
84.1
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
83.7
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
83.1
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
82.8
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
82.6
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
81.9
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
81.1
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
81.0
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
80.4
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
80.2
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
79.1
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
77.0
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
74.9
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
73.7
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
73.3
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
72.5
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
69.9
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
68.9
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
67.0
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
66.9
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
66.6
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
65.6
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
65.4
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
65.0
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
64.6
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
64.4
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
64.2
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
62.6
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
62.3
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
62.2
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
62.2
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
61.4
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
61.4
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
60.6
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
60.4
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
60.4
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
60.1
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
59.7
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
58.8
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
58.1
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
57.7
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
57.3
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
57.2
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
57.1
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
56.9
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
56.8
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
56.3
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
55.8
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
55.5
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
55.2
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
55.2
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
54.9
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
54.8
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
54.6
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
54.5
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
54.2
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
53.8
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
53.3
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
53.2
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
53.1
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
53.1
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
52.9
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
52.5
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
51.6
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
51.6
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
50.5
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
50.3
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
50.1
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
50.0
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
49.6
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
49.3
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
49.0
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
48.6
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
48.1
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
48.1
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
47.7
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
47.5
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
47.4
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
47.3
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
47.1
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
46.9
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
46.8
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
46.6
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
46.1
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
45.2
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
45.1
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
44.8
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
44.8
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
43.8
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
43.7
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
43.5
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
43.2
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
42.8
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
42.7
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
42.3
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
42.2
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
42.1
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
42.0
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
41.9
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
41.5
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
41.5
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
41.1
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
40.7
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
40.6
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
40.4
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
40.3
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
39.7
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
38.4
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
38.2
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
37.6
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
37.4
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
37.0
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
36.9
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
36.9
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
35.7
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
35.7
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
35.4
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
35.0
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
34.0
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
33.8
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
33.5
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
32.9
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
32.8
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
32.5
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
32.3
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
31.0
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
30.4
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
29.9
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
29.7
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
28.6
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
28.4
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
27.7
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
27.7
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
27.2
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
26.7
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
26.3
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
24.9
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
24.4
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
23.5
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
23.4
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
18.1
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
12.3
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
21.7
Mouse sample
Sample description
nTPM
Amygdala nTPM: 21.7
Samples: 4
Max nTPM: 24.5
Min nTPM: 18.7
Sample A
Male
20.3
Sample B
Male
18.7
Sample C
Female
24.5
Sample D
Female
23.1
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.