HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
RNA expressioni
Consensus:40.0 nTPM
HPA Brain:61.1 nTPM
GTEx:40.0 nTPM
FANTOM5:32.7 Scaled Tags Per Million
Pig:19.3 nTPM
Mouse:10.4 nTPM

HIPPOCAMPUS - Antibody stainingi
Antibody HPA036022
Glial cells Medium
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 61.1
Sample id Sample description nTPM
Hippocampus
nTPM: 61.1
2529 Female, age 94, left hemisphere 74.7
2621 Female, age 67, right hemisphere 67.6
2148 Female, age 91, left hemisphere 65.5
1911 Female, age 85, right hemisphere 54.8
1898 Male, age 80, left hemisphere 52.3
1855 Male, age 76, left hemisphere 51.9
Dentate gyrus
nTPM: 60.8
2530 Female, age 94, left hemisphere 75.4
2531 Female, age 67, both hemispheres 71.2
2528 Male, age 74, both hemispheres 57.5
2246 Female, age 85, both hemispheres 54.3
2010 Male, age 76, both hemispheres 54.0
1927 Female, age 91, both hemispheres 52.2
Entorhinal gyrus
nTPM: 57.8
2117 Female, age 91, right hemisphere 63.9
2613 Female, age 94, left hemisphere 63.9
2686 Male, age 75, right hemisphere 60.5
2764 Male, age 80, right hemisphere 57.5
1787 Male, age 76, left hemisphere 52.1
1938 Female, age 85, left hemisphere 49.0
Hippocampus, CA1
nTPM: 50.4
2082 Female, age 91, right hemisphere 59.8
2527 Male, age 74, both hemispheres 56.4
1873 Female, age 85, both hemispheres 47.0
2045 Male, age 76, both hemispheres 45.4
2749 Male, age 80, left hemisphere 43.3
Hippocampus, CA2
nTPM: 59.3
1963 Male, age 80, left hemisphere 73.8
2437 Female, age 94, left hemisphere 66.2
1940 Female, age 85, left hemisphere 58.3
2113 Female, age 91, right hemisphere 57.2
2249 Male, age 74, both hemispheres 54.0
1892 Male, age 76, both hemispheres 46.3
Hippocampus, CA3
nTPM: 59.5
2861 Female, age 67, both hemispheres 84.6
2436 Male, age 74, both hemispheres 69.4
2620 Female, age 94, left hemisphere 66.1
1891 Female, age 85, both hemispheres 51.1
1867 Male, age 76, both hemispheres 44.2
2137 Male, age 80, left hemisphere 41.9
Parahippocampal cortex
nTPM: 51.4
2622 Female, age 67, right hemisphere 67.5
2532 Female, age 72, left hemisphere 58.0
2692 Male, age 74, both hemispheres 57.8
2245 Female, age 91, both hemispheres 54.5
1990 Female, age 91, right hemisphere 49.8
2018 Male, age 76, both hemispheres 49.7
1933 Female, age 85, both hemispheres 45.4
2250 Female, age 67, right hemisphere 45.2
2693 Female, age 94, both hemispheres 43.8
1850 Male, age 80, both hemispheres 42.5
Perirhinal gyrus
nTPM: 46.0
1794 Male, age 80, right hemisphere 52.4
2521 Female, age 94, right hemisphere 45.8
2848 Male, age 76, right hemisphere 45.6
1841 Female, age 85, right hemisphere 44.5
1847 Female, age 91, left hemisphere 41.6
Subiculum
nTPM: 54.1
2729 Female, age 91, right hemisphere 59.2
2438 Female, age 94, left hemisphere 57.9
2619 Male, age 74, both hemispheres 57.9
1977 Female, age 85, both hemispheres 53.1
2042 Male, age 76, both hemispheres 49.6
1901 Male, age 80, both hemispheres 47.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 40.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 40.0
Samples: 197

Max nTPM: 74.5
Min nTPM: 22.0
Std nTPM: 8.1
Median nTPM: 39.0
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 74.5
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 68.7
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 61.3
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 59.6
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 59.0
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 57.3
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 56.1
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 54.4
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 54.1
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 54.0
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 53.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 32.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 32.7
FF:10153-102I9 76 years, female 42.6
FF:10169-103B7 60 years, female 22.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 19.3
Pig sample Sample description nTPM
Subiculum
nTPM: 17.7
Samples: 4

Max nTPM: 24.2
Min nTPM: 14.5
Sample A Female 24.2
Sample B Female 15.7
Sample C Male 16.2
Sample D Male 14.5
Dorsal hippocampus
nTPM: 17.8
Samples: 4

Max nTPM: 21.5
Min nTPM: 14.7
Sample A Female 21.5
Sample B Female 17.6
Sample C Male 17.4
Sample D Male 14.7
Entorhinal cortex
nTPM: 18.5
Samples: 4

Max nTPM: 22.1
Min nTPM: 14.7
Sample A Female 19.1
Sample B Female 18.0
Sample C Male 22.1
Sample D Male 14.7
Ventral hippocampus
nTPM: 19.3
Samples: 4

Max nTPM: 26.5
Min nTPM: 15.1
Sample A Female 19.3
Sample B Female 15.1
Sample C Male 26.5
Sample D Male 16.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 10.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 10.4
Samples: 4

Max nTPM: 11.5
Min nTPM: 8.9
Sample A Male 11.4
Sample B Male 11.5
Sample C Female 9.8
Sample D Female 8.9
Hippocampal formation
nTPM: 9.9
Samples: 4

Max nTPM: 10.2
Min nTPM: 9.4
Sample A Male 9.9
Sample B Male 10.2
Sample C Female 9.4
Sample D Female 10.2

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