HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:31.0 nTPM
HPA Brain:12.3 nTPM
GTEx:31.0 nTPM
FANTOM5:22.3 Scaled Tags Per Million
Pig:66.9 nTPM
Mouse:30.7 nTPM
Allen mouse:5.0 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 12.3
Sample id Sample description nTPM
Hippocampus
nTPM: 12.0
1855 Male, age 76, left hemisphere 15.8
1898 Male, age 80, left hemisphere 14.4
1911 Female, age 85, right hemisphere 11.6
2148 Female, age 91, left hemisphere 11.2
2621 Female, age 67, right hemisphere 9.5
2529 Female, age 94, left hemisphere 9.2
Dentate gyrus
nTPM: 11.0
2010 Male, age 76, both hemispheres 14.7
2246 Female, age 85, both hemispheres 11.5
2531 Female, age 67, both hemispheres 11.5
2530 Female, age 94, left hemisphere 10.6
1927 Female, age 91, both hemispheres 10.0
2528 Male, age 74, both hemispheres 7.7
Entorhinal gyrus
nTPM: 10.8
1938 Female, age 85, left hemisphere 13.8
2613 Female, age 94, left hemisphere 12.4
1787 Male, age 76, left hemisphere 12.3
2686 Male, age 75, right hemisphere 9.9
2764 Male, age 80, right hemisphere 8.2
2117 Female, age 91, right hemisphere 8.1
Hippocampus, CA1
nTPM: 9.7
2749 Male, age 80, left hemisphere 13.7
2082 Female, age 91, right hemisphere 11.6
2527 Male, age 74, both hemispheres 8.7
2045 Male, age 76, both hemispheres 7.5
1873 Female, age 85, both hemispheres 6.9
Hippocampus, CA2
nTPM: 10.7
1892 Male, age 76, both hemispheres 15.0
1940 Female, age 85, left hemisphere 12.1
2437 Female, age 94, left hemisphere 10.2
2113 Female, age 91, right hemisphere 9.8
2249 Male, age 74, both hemispheres 8.6
1963 Male, age 80, left hemisphere 8.3
Hippocampus, CA3
nTPM: 11.0
2620 Female, age 94, left hemisphere 14.6
1867 Male, age 76, both hemispheres 13.4
2137 Male, age 80, left hemisphere 12.4
2436 Male, age 74, both hemispheres 10.4
2861 Female, age 67, both hemispheres 9.1
1891 Female, age 85, both hemispheres 6.0
Parahippocampal cortex
nTPM: 10.7
1933 Female, age 85, both hemispheres 14.0
2693 Female, age 94, both hemispheres 12.6
2622 Female, age 67, right hemisphere 12.0
2250 Female, age 67, right hemisphere 11.0
2692 Male, age 74, both hemispheres 10.3
2018 Male, age 76, both hemispheres 10.2
2532 Female, age 72, left hemisphere 9.8
1990 Female, age 91, right hemisphere 9.4
1850 Male, age 80, both hemispheres 9.3
2245 Female, age 91, both hemispheres 8.1
Perirhinal gyrus
nTPM: 12.3
1841 Female, age 85, right hemisphere 17.7
1794 Male, age 80, right hemisphere 12.5
2848 Male, age 76, right hemisphere 10.9
1847 Female, age 91, left hemisphere 10.6
2521 Female, age 94, right hemisphere 9.6
Subiculum
nTPM: 10.5
1977 Female, age 85, both hemispheres 16.3
2619 Male, age 74, both hemispheres 10.8
1901 Male, age 80, both hemispheres 10.1
2042 Male, age 76, both hemispheres 9.5
2729 Female, age 91, right hemisphere 9.1
2438 Female, age 94, left hemisphere 7.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 31.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 31.0
Samples: 197

Max nTPM: 80.2
Min nTPM: 9.8
Std nTPM: 10.2
Median nTPM: 29.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 80.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 75.5
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 55.1
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 54.6
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 52.2
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 51.9
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 51.6
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 51.4
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 51.0
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 50.8
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 50.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 22.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 22.3
FF:10169-103B7 60 years, female 25.9
FF:10153-102I9 76 years, female 18.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 66.9
Pig sample Sample description nTPM
Subiculum
nTPM: 56.6
Samples: 4

Max nTPM: 75.6
Min nTPM: 48.4
Sample A Female 75.6
Sample B Female 51.7
Sample C Male 50.7
Sample D Male 48.4
Dorsal hippocampus
nTPM: 67.0
Samples: 4

Max nTPM: 90.0
Min nTPM: 52.4
Sample A Female 90.0
Sample B Female 57.4
Sample C Male 68.0
Sample D Male 52.4
Entorhinal cortex
nTPM: 60.1
Samples: 4

Max nTPM: 69.0
Min nTPM: 50.0
Sample A Female 59.1
Sample B Female 62.3
Sample C Male 69.0
Sample D Male 50.0
Ventral hippocampus
nTPM: 60.8
Samples: 4

Max nTPM: 70.8
Min nTPM: 46.5
Sample A Female 62.9
Sample B Female 46.5
Sample C Male 70.8
Sample D Male 63.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 30.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 19.9
Samples: 4

Max nTPM: 21.1
Min nTPM: 17.7
Sample A Male 17.7
Sample B Male 20.7
Sample C Female 21.1
Sample D Female 20.2
Hippocampal formation
nTPM: 30.7
Samples: 4

Max nTPM: 38.1
Min nTPM: 22.2
Sample A Male 24.7
Sample B Male 38.1
Sample C Female 22.2
Sample D Female 37.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.0
2391 Antisense, RP_040604_01_F12, Mouse strain C57BL/6J (56 days, male) 5.0
2392 Antisense, RP_040604_01_F12, Mouse strain C57BL/6J (56 days, male) 2.3

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