HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:4.7 nTPM
HPA Brain:17.6 nTPM
GTEx:4.7 nTPM
FANTOM5:1.4 Scaled Tags Per Million
Pig:11.0 nTPM
Mouse:20.4 nTPM
Allen mouse:1.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA059558
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 17.6
Sample id Sample description nTPM
Hippocampus
nTPM: 14.8
1911 Female, age 85, right hemisphere 19.2
2529 Female, age 94, left hemisphere 16.5
2148 Female, age 91, left hemisphere 14.2
1855 Male, age 76, left hemisphere 13.2
1898 Male, age 80, left hemisphere 12.9
2621 Female, age 67, right hemisphere 12.8
Dentate gyrus
nTPM: 12.8
1927 Female, age 91, both hemispheres 15.3
2530 Female, age 94, left hemisphere 15.0
2010 Male, age 76, both hemispheres 13.1
2246 Female, age 85, both hemispheres 11.5
2531 Female, age 67, both hemispheres 11.1
2528 Male, age 74, both hemispheres 10.6
Entorhinal gyrus
nTPM: 11.7
1787 Male, age 76, left hemisphere 14.8
2613 Female, age 94, left hemisphere 13.5
2117 Female, age 91, right hemisphere 11.8
1938 Female, age 85, left hemisphere 10.8
2764 Male, age 80, right hemisphere 10.0
2686 Male, age 75, right hemisphere 9.3
Hippocampus, CA1
nTPM: 15.9
2749 Male, age 80, left hemisphere 28.0
2045 Male, age 76, both hemispheres 15.6
2082 Female, age 91, right hemisphere 13.4
2527 Male, age 74, both hemispheres 12.0
1873 Female, age 85, both hemispheres 10.3
Hippocampus, CA2
nTPM: 14.1
1940 Female, age 85, left hemisphere 15.4
2437 Female, age 94, left hemisphere 15.0
1892 Male, age 76, both hemispheres 14.7
2113 Female, age 91, right hemisphere 14.6
1963 Male, age 80, left hemisphere 13.5
2249 Male, age 74, both hemispheres 11.6
Hippocampus, CA3
nTPM: 17.6
2137 Male, age 80, left hemisphere 41.6
1867 Male, age 76, both hemispheres 18.5
2861 Female, age 67, both hemispheres 17.0
2620 Female, age 94, left hemisphere 10.4
1891 Female, age 85, both hemispheres 9.7
2436 Male, age 74, both hemispheres 8.2
Parahippocampal cortex
nTPM: 12.3
2245 Female, age 91, both hemispheres 18.7
2250 Female, age 67, right hemisphere 18.3
2018 Male, age 76, both hemispheres 14.9
2622 Female, age 67, right hemisphere 13.5
1990 Female, age 91, right hemisphere 12.1
1933 Female, age 85, both hemispheres 11.0
2693 Female, age 94, both hemispheres 10.4
2692 Male, age 74, both hemispheres 9.2
2532 Female, age 72, left hemisphere 8.2
1850 Male, age 80, both hemispheres 6.7
Perirhinal gyrus
nTPM: 11.8
2521 Female, age 94, right hemisphere 24.1
1847 Female, age 91, left hemisphere 11.7
1794 Male, age 80, right hemisphere 9.3
1841 Female, age 85, right hemisphere 7.7
2848 Male, age 76, right hemisphere 6.2
Subiculum
nTPM: 15.6
1901 Male, age 80, both hemispheres 24.5
2042 Male, age 76, both hemispheres 18.4
1977 Female, age 85, both hemispheres 14.2
2619 Male, age 74, both hemispheres 13.4
2729 Female, age 91, right hemisphere 11.6
2438 Female, age 94, left hemisphere 11.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 4.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 4.7
Samples: 197

Max nTPM: 14.9
Min nTPM: 0.5
Std nTPM: 2.3
Median nTPM: 4.4
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 14.9
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 11.0
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 11.0
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 10.5
GTEX-16Z82-0011-R1b-SM-7EPHZ 60-69 years, male 10.4
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 9.9
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 9.8
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 9.5
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 9.4
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 9.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 9.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 1.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 1.4
FF:10153-102I9 76 years, female 2.8
FF:10169-103B7 60 years, female 0.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 11.0
Pig sample Sample description nTPM
Subiculum
nTPM: 1.9
Samples: 4

Max nTPM: 3.2
Min nTPM: 1.2
Sample A Female 3.2
Sample B Female 1.7
Sample C Male 1.4
Sample D Male 1.2
Dorsal hippocampus
nTPM: 11.1
Samples: 4

Max nTPM: 15.0
Min nTPM: 5.8
Sample A Female 13.3
Sample B Female 15.0
Sample C Male 5.8
Sample D Male 10.1
Entorhinal cortex
nTPM: 2.6
Samples: 4

Max nTPM: 3.3
Min nTPM: 1.8
Sample A Female 3.3
Sample B Female 2.0
Sample C Male 3.1
Sample D Male 1.8
Ventral hippocampus
nTPM: 6.5
Samples: 4

Max nTPM: 21.3
Min nTPM: 1.1
Sample A Female 1.1
Sample B Female 2.1
Sample C Male 1.6
Sample D Male 21.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 20.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 8.7
Samples: 4

Max nTPM: 9.6
Min nTPM: 7.0
Sample A Male 9.3
Sample B Male 7.0
Sample C Female 8.9
Sample D Female 9.6
Hippocampal formation
nTPM: 20.4
Samples: 4

Max nTPM: 33.7
Min nTPM: 13.3
Sample A Male 13.3
Sample B Male 20.5
Sample C Female 33.7
Sample D Female 14.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.9
100143455 Antisense, RP_110407_01_C07, Mouse strain C57BL/6J (56 days, male) 1.9

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