HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:734.8 nTPM
HPA Brain:324.3 nTPM
GTEx:734.8 nTPM
FANTOM5:191.4 Scaled Tags Per Million
Pig:1555.8 nTPM
Mouse:327.8 nTPM
Allen mouse:22.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041344Antibody HPA049132
Glial cells LowLow
Neuronal cells LowMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 324.3
Sample id Sample description nTPM
Hippocampus
nTPM: 321.4
1898 Male, age 80, left hemisphere 372.5
2529 Female, age 94, left hemisphere 344.7
2621 Female, age 67, right hemisphere 322.1
1855 Male, age 76, left hemisphere 315.5
1911 Female, age 85, right hemisphere 292.5
2148 Female, age 91, left hemisphere 281.2
Dentate gyrus
nTPM: 324.3
2530 Female, age 94, left hemisphere 408.6
2010 Male, age 76, both hemispheres 397.4
2246 Female, age 85, both hemispheres 314.0
2531 Female, age 67, both hemispheres 290.4
1927 Female, age 91, both hemispheres 281.6
2528 Male, age 74, both hemispheres 253.7
Entorhinal gyrus
nTPM: 305.4
1787 Male, age 76, left hemisphere 368.6
2686 Male, age 75, right hemisphere 329.9
1938 Female, age 85, left hemisphere 302.3
2764 Male, age 80, right hemisphere 295.6
2117 Female, age 91, right hemisphere 285.8
2613 Female, age 94, left hemisphere 250.5
Hippocampus, CA1
nTPM: 318.3
2749 Male, age 80, left hemisphere 393.0
2045 Male, age 76, both hemispheres 355.4
1873 Female, age 85, both hemispheres 292.5
2527 Male, age 74, both hemispheres 277.3
2082 Female, age 91, right hemisphere 273.4
Hippocampus, CA2
nTPM: 317.6
1963 Male, age 80, left hemisphere 391.9
1892 Male, age 76, both hemispheres 350.7
2437 Female, age 94, left hemisphere 326.3
1940 Female, age 85, left hemisphere 295.6
2249 Male, age 74, both hemispheres 276.3
2113 Female, age 91, right hemisphere 265.1
Hippocampus, CA3
nTPM: 296.6
1867 Male, age 76, both hemispheres 372.1
2137 Male, age 80, left hemisphere 336.2
2861 Female, age 67, both hemispheres 285.1
1891 Female, age 85, both hemispheres 283.1
2436 Male, age 74, both hemispheres 254.2
2620 Female, age 94, left hemisphere 249.1
Parahippocampal cortex
nTPM: 283.6
2018 Male, age 76, both hemispheres 388.8
1850 Male, age 80, both hemispheres 320.6
2245 Female, age 91, both hemispheres 307.4
2532 Female, age 72, left hemisphere 304.5
1933 Female, age 85, both hemispheres 289.5
2250 Female, age 67, right hemisphere 283.7
1990 Female, age 91, right hemisphere 275.0
2692 Male, age 74, both hemispheres 244.0
2622 Female, age 67, right hemisphere 226.2
2693 Female, age 94, both hemispheres 196.0
Perirhinal gyrus
nTPM: 315.8
1794 Male, age 80, right hemisphere 357.7
1847 Female, age 91, left hemisphere 339.7
1841 Female, age 85, right hemisphere 329.9
2848 Male, age 76, right hemisphere 295.9
2521 Female, age 94, right hemisphere 255.8
Subiculum
nTPM: 307.7
2042 Male, age 76, both hemispheres 382.9
1977 Female, age 85, both hemispheres 329.8
1901 Male, age 80, both hemispheres 320.9
2438 Female, age 94, left hemisphere 294.0
2619 Male, age 74, both hemispheres 266.6
2729 Female, age 91, right hemisphere 252.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 734.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 734.8
Samples: 197

Max nTPM: 1391.1
Min nTPM: 407.8
Std nTPM: 209.4
Median nTPM: 696.2
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 1391.1
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 1352.4
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 1344.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 1307.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 1284.6
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 1272.6
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 1258.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 1253.1
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 1231.5
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 1220.9
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 1198.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 191.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 191.4
FF:10169-103B7 60 years, female 234.7
FF:10153-102I9 76 years, female 148.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 1555.8
Pig sample Sample description nTPM
Subiculum
nTPM: 1194.9
Samples: 4

Max nTPM: 1622.3
Min nTPM: 978.8
Sample A Female 1622.3
Sample B Female 1068.0
Sample C Male 978.8
Sample D Male 1110.3
Dorsal hippocampus
nTPM: 1555.8
Samples: 4

Max nTPM: 2078.1
Min nTPM: 1097.2
Sample A Female 2078.1
Sample B Female 1279.9
Sample C Male 1768.0
Sample D Male 1097.2
Entorhinal cortex
nTPM: 1306.1
Samples: 4

Max nTPM: 1448.6
Min nTPM: 1052.7
Sample A Female 1305.4
Sample B Female 1417.5
Sample C Male 1448.6
Sample D Male 1052.7
Ventral hippocampus
nTPM: 1312.2
Samples: 4

Max nTPM: 1522.8
Min nTPM: 1013.5
Sample A Female 1256.9
Sample B Female 1013.5
Sample C Male 1522.8
Sample D Male 1455.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 327.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 313.4
Samples: 4

Max nTPM: 341.7
Min nTPM: 286.2
Sample A Male 286.2
Sample B Male 305.6
Sample C Female 320.0
Sample D Female 341.7
Hippocampal formation
nTPM: 327.8
Samples: 4

Max nTPM: 356.1
Min nTPM: 316.3
Sample A Male 356.1
Sample B Male 317.7
Sample C Female 316.3
Sample D Female 321.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 22.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 22.4
69013702 Antisense, RP_050309_02_G10, Mouse strain C57BL/6J (56 days, male) 22.4

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