HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:133.9 nTPM
HPA Brain:65.0 nTPM
GTEx:133.9 nTPM
FANTOM5:57.0 Scaled Tags Per Million
Pig:189.4 nTPM
Mouse:7.6 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA057732
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 65.0
Sample id Sample description nTPM
Hippocampus
nTPM: 65.0
2529 Female, age 94, left hemisphere 77.7
1898 Male, age 80, left hemisphere 73.5
1911 Female, age 85, right hemisphere 63.0
2621 Female, age 67, right hemisphere 62.9
2148 Female, age 91, left hemisphere 61.0
1855 Male, age 76, left hemisphere 51.7
Dentate gyrus
nTPM: 60.7
2530 Female, age 94, left hemisphere 73.3
2010 Male, age 76, both hemispheres 64.3
2246 Female, age 85, both hemispheres 59.4
2528 Male, age 74, both hemispheres 57.5
1927 Female, age 91, both hemispheres 55.9
2531 Female, age 67, both hemispheres 53.8
Entorhinal gyrus
nTPM: 57.6
2117 Female, age 91, right hemisphere 64.2
1938 Female, age 85, left hemisphere 61.6
2764 Male, age 80, right hemisphere 61.2
1787 Male, age 76, left hemisphere 58.5
2613 Female, age 94, left hemisphere 51.4
2686 Male, age 75, right hemisphere 48.5
Hippocampus, CA1
nTPM: 63.4
2749 Male, age 80, left hemisphere 95.2
2527 Male, age 74, both hemispheres 80.6
1873 Female, age 85, both hemispheres 55.3
2045 Male, age 76, both hemispheres 46.4
2082 Female, age 91, right hemisphere 39.5
Hippocampus, CA2
nTPM: 59.6
1963 Male, age 80, left hemisphere 78.2
1892 Male, age 76, both hemispheres 66.1
2249 Male, age 74, both hemispheres 65.4
2437 Female, age 94, left hemisphere 56.2
1940 Female, age 85, left hemisphere 47.5
2113 Female, age 91, right hemisphere 44.1
Hippocampus, CA3
nTPM: 59.3
2861 Female, age 67, both hemispheres 68.0
2137 Male, age 80, left hemisphere 64.0
1891 Female, age 85, both hemispheres 61.1
1867 Male, age 76, both hemispheres 59.4
2436 Male, age 74, both hemispheres 59.4
2620 Female, age 94, left hemisphere 43.7
Parahippocampal cortex
nTPM: 55.3
2245 Female, age 91, both hemispheres 76.8
2018 Male, age 76, both hemispheres 66.4
2250 Female, age 67, right hemisphere 62.4
1933 Female, age 85, both hemispheres 56.4
1990 Female, age 91, right hemisphere 54.0
2692 Male, age 74, both hemispheres 51.4
1850 Male, age 80, both hemispheres 50.9
2622 Female, age 67, right hemisphere 50.1
2532 Female, age 72, left hemisphere 49.2
2693 Female, age 94, both hemispheres 35.9
Perirhinal gyrus
nTPM: 55.0
1847 Female, age 91, left hemisphere 64.7
1794 Male, age 80, right hemisphere 57.9
1841 Female, age 85, right hemisphere 57.3
2521 Female, age 94, right hemisphere 51.2
2848 Male, age 76, right hemisphere 43.9
Subiculum
nTPM: 61.7
1977 Female, age 85, both hemispheres 70.7
1901 Male, age 80, both hemispheres 68.8
2042 Male, age 76, both hemispheres 66.9
2619 Male, age 74, both hemispheres 57.1
2729 Female, age 91, right hemisphere 53.6
2438 Female, age 94, left hemisphere 53.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 133.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 133.9
Samples: 197

Max nTPM: 375.7
Min nTPM: 35.4
Std nTPM: 54.6
Median nTPM: 118.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 375.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 310.8
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 293.7
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 293.3
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 283.2
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 280.1
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 255.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 254.6
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 251.9
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 249.9
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 247.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 57.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 57.0
FF:10169-103B7 60 years, female 67.5
FF:10153-102I9 76 years, female 46.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 189.4
Pig sample Sample description nTPM
Subiculum
nTPM: 153.2
Samples: 4

Max nTPM: 200.2
Min nTPM: 119.3
Sample A Female 200.2
Sample B Female 155.1
Sample C Male 138.1
Sample D Male 119.3
Dorsal hippocampus
nTPM: 188.2
Samples: 4

Max nTPM: 262.2
Min nTPM: 122.3
Sample A Female 262.2
Sample B Female 164.7
Sample C Male 203.7
Sample D Male 122.3
Entorhinal cortex
nTPM: 189.4
Samples: 4

Max nTPM: 233.6
Min nTPM: 141.6
Sample A Female 155.7
Sample B Female 233.6
Sample C Male 226.7
Sample D Male 141.6
Ventral hippocampus
nTPM: 166.9
Samples: 4

Max nTPM: 215.3
Min nTPM: 122.0
Sample A Female 138.2
Sample B Female 122.0
Sample C Male 215.3
Sample D Male 191.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 7.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 7.7
Samples: 4

Max nTPM: 9.2
Min nTPM: 6.3
Sample A Male 6.3
Sample B Male 9.2
Sample C Female 8.2
Sample D Female 6.9
Hippocampal formation
nTPM: 5.2
Samples: 4

Max nTPM: 6.8
Min nTPM: 3.3
Sample A Male 6.8
Sample B Male 6.5
Sample C Female 4.1
Sample D Female 3.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
71211290 Antisense, RP_050816_01_B04, Mouse strain C57BL/6J (56 days, male) 0.0

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