HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:43.1 nTPM
HPA Brain:23.3 nTPM
GTEx:43.1 nTPM
FANTOM5:123.1 Scaled Tags Per Million
Pig:23.5 nTPM
Mouse:24.5 nTPM
Allen mouse:0.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA029185
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 23.3
Sample id Sample description nTPM
Hippocampus
nTPM: 22.6
2529 Female, age 94, left hemisphere 25.9
1898 Male, age 80, left hemisphere 25.0
1911 Female, age 85, right hemisphere 23.7
1855 Male, age 76, left hemisphere 22.2
2148 Female, age 91, left hemisphere 20.2
2621 Female, age 67, right hemisphere 18.8
Dentate gyrus
nTPM: 20.7
2010 Male, age 76, both hemispheres 23.5
1927 Female, age 91, both hemispheres 21.1
2246 Female, age 85, both hemispheres 21.0
2530 Female, age 94, left hemisphere 20.8
2528 Male, age 74, both hemispheres 20.4
2531 Female, age 67, both hemispheres 17.4
Entorhinal gyrus
nTPM: 21.4
1938 Female, age 85, left hemisphere 24.9
1787 Male, age 76, left hemisphere 24.0
2117 Female, age 91, right hemisphere 23.4
2686 Male, age 75, right hemisphere 20.4
2764 Male, age 80, right hemisphere 20.0
2613 Female, age 94, left hemisphere 15.9
Hippocampus, CA1
nTPM: 22.2
2749 Male, age 80, left hemisphere 25.6
2527 Male, age 74, both hemispheres 23.4
1873 Female, age 85, both hemispheres 23.1
2045 Male, age 76, both hemispheres 21.5
2082 Female, age 91, right hemisphere 17.5
Hippocampus, CA2
nTPM: 21.7
1892 Male, age 76, both hemispheres 22.6
2249 Male, age 74, both hemispheres 22.6
1940 Female, age 85, left hemisphere 21.9
2113 Female, age 91, right hemisphere 21.8
2437 Female, age 94, left hemisphere 20.8
1963 Male, age 80, left hemisphere 20.4
Hippocampus, CA3
nTPM: 22.0
2137 Male, age 80, left hemisphere 24.8
1867 Male, age 76, both hemispheres 23.9
2436 Male, age 74, both hemispheres 23.0
1891 Female, age 85, both hemispheres 22.9
2861 Female, age 67, both hemispheres 19.0
2620 Female, age 94, left hemisphere 18.4
Parahippocampal cortex
nTPM: 22.4
2245 Female, age 91, both hemispheres 24.2
2018 Male, age 76, both hemispheres 23.8
2693 Female, age 94, both hemispheres 23.6
2250 Female, age 67, right hemisphere 23.4
1990 Female, age 91, right hemisphere 23.0
2692 Male, age 74, both hemispheres 22.7
1850 Male, age 80, both hemispheres 22.4
2532 Female, age 72, left hemisphere 21.8
1933 Female, age 85, both hemispheres 21.3
2622 Female, age 67, right hemisphere 17.5
Perirhinal gyrus
nTPM: 21.9
1841 Female, age 85, right hemisphere 23.4
1847 Female, age 91, left hemisphere 21.9
1794 Male, age 80, right hemisphere 21.7
2848 Male, age 76, right hemisphere 21.6
2521 Female, age 94, right hemisphere 20.7
Subiculum
nTPM: 23.3
1901 Male, age 80, both hemispheres 25.7
2042 Male, age 76, both hemispheres 24.8
2438 Female, age 94, left hemisphere 24.7
1977 Female, age 85, both hemispheres 22.7
2619 Male, age 74, both hemispheres 21.5
2729 Female, age 91, right hemisphere 20.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 43.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 43.1
Samples: 197

Max nTPM: 89.6
Min nTPM: 27.3
Std nTPM: 8.3
Median nTPM: 41.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 89.6
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 81.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 66.3
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 63.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 60.5
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 60.0
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 60.0
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 58.0
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 57.0
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 54.7
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 54.6
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 123.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 123.1
FF:10153-102I9 76 years, female 123.7
FF:10169-103B7 60 years, female 122.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 23.5
Pig sample Sample description nTPM
Subiculum
nTPM: 22.4
Samples: 4

Max nTPM: 23.3
Min nTPM: 21.5
Sample A Female 22.0
Sample B Female 22.9
Sample C Male 21.5
Sample D Male 23.3
Dorsal hippocampus
nTPM: 22.5
Samples: 4

Max nTPM: 23.3
Min nTPM: 21.5
Sample A Female 21.5
Sample B Female 22.5
Sample C Male 23.3
Sample D Male 22.6
Entorhinal cortex
nTPM: 23.5
Samples: 4

Max nTPM: 25.1
Min nTPM: 22.2
Sample A Female 22.2
Sample B Female 25.1
Sample C Male 23.3
Sample D Male 23.3
Ventral hippocampus
nTPM: 22.0
Samples: 4

Max nTPM: 23.9
Min nTPM: 19.6
Sample A Female 23.9
Sample B Female 23.4
Sample C Male 19.6
Sample D Male 20.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 24.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 22.3
Samples: 4

Max nTPM: 25.6
Min nTPM: 16.1
Sample A Male 25.6
Sample B Male 24.6
Sample C Female 22.8
Sample D Female 16.1
Hippocampal formation
nTPM: 24.5
Samples: 4

Max nTPM: 28.9
Min nTPM: 22.8
Sample A Male 28.9
Sample B Male 22.8
Sample C Female 23.0
Sample D Female 23.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.6
69782306 Antisense, RP_050505_02_G01, Mouse strain C57BL/6J (56 days, male) 0.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org