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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
518.2
nTPM
FANTOM5:
95.9
Scaled Tags Per Million
Allen mouse:
3.2
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
518.2
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 460.9
2090
Male, age 80, both hemispheres
571.8
2188
Female, age 91, both hemispheres
516.3
1984
Male, age 76, both hemispheres
387.9
2301
Female, age 85, both hemispheres
367.5
Dorsal cochlear nucleus nTPM: 466.4
2802
Male, age 74, right hemisphere
562.4
2187
Female, age 91, both hemispheres
502.3
2370
Male, age 61, both hemispheres
436.7
2378
Male, age 80, both hemispheres
435.3
2058
Male, age 76, both hemispheres
395.2
Dorsal tegmental nucleus nTPM: 490.5
2083
Male, age 80, both hemispheres
542.3
2326
Male, age 74, both hemispheres
541.0
2358
Male, age 61, both hemispheres
446.6
1936
Male, age 76, left hemisphere
432.2
Dorsolateral tegmental area nTPM: 480.4
2654
Male, age 80, both hemispheres
570.9
2337
Male, age 61, both hemispheres
565.1
2751
Female, age 85, both hemispheres
464.2
2360
Male, age 74, both hemispheres
413.4
2141
Male, age 76, both hemispheres
388.5
Kolliker-Fuse nucleus nTPM: 449.9
2315
Male, age 76, right hemisphere
540.8
2163
Male, age 80, both hemispheres
411.5
2793
Female, age 91, left hemisphere
397.5
Lateral lemniscal nuclei nTPM: 322.2
2453
Male, age 74, right hemisphere
347.2
2746
Female, age 85, left hemisphere
345.7
2320
Female, age 91, left hemisphere
343.2
2169
Male, age 76, both hemispheres
314.0
2036
Male, age 80, both hemispheres
261.0
Lateral parabrachial nucleus nTPM: 480.8
2792
Male, age 76, both hemispheres
553.5
2013
Male, age 80, both hemispheres
516.2
2790
Male, age 61, both hemispheres
431.1
2139
Female, age 85, right hemisphere
422.5
Lateral vestibular nucleus nTPM: 428.0
2311
Male, age 80, both hemispheres
518.0
2184
Male, age 76, both hemispheres
338.1
Locus coeruleus nTPM: 396.5
2720
Male, age 74, both hemispheres
438.2
2014
Male, age 55, unknown
414.1
2123
Female, age 91, both hemispheres
412.1
2162
Male, age 80, both hemispheres
402.7
2317
Female, age 72, unknown
401.8
2788
Male, age 74, unknown
360.1
1980
Male, age 76, both hemispheres
346.8
Medial parabrachial nucleus nTPM: 451.3
2170
Female, age 91, both hemispheres
548.4
2463
Female, age 85, right hemisphere
443.0
2786
Male, age 76, both hemispheres
433.2
2156
Male, age 61, both hemispheres
417.0
2854
Male, age 80, both hemispheres
414.8
Medial periolivary nuclei nTPM: 383.3
2081
Male, age 80, both hemispheres
460.2
2063
Male, age 76, both hemispheres
450.0
2458
Female, age 91, both hemispheres
381.1
2791
Male, age 74, right hemisphere
348.3
2171
Female, age 85, both hemispheres
276.8
Motor facial nucleus nTPM: 367.5
2126
Male, age 61, both hemispheres
459.9
2795
Female, age 91, both hemispheres
403.0
2365
Male, age 74, right hemisphere
363.0
2062
Male, age 76, both hemispheres
361.1
2697
Female, age 85, both hemispheres
332.5
2327
Male, age 80, both hemispheres
285.6
Motor trigeminal nucleus nTPM: 411.5
2335
Male, age 61, both hemispheres
459.0
2309
Male, age 76, both hemispheres
424.0
2560
Male, age 74, both hemispheres
413.7
2321
Female, age 91, both hemispheres
397.2
2079
Male, age 80, both hemispheres
363.8
Nuclei of the trapezoid body nTPM: 355.7
1983
Male, age 76, both hemispheres
475.0
2166
Male, age 80, both hemispheres
359.3
2368
Female, age 91, both hemispheres
333.9
2159
Male, age 61, both hemispheres
332.2
2735
Female, age 85, both hemispheres
278.0
Nucleus raphe magnus nTPM: 329.3
2459
Female, age 91, both hemispheres
378.0
2051
Male, age 76, both hemispheres
367.6
2455
Male, age 74, both hemispheres
342.6
2328
Male, age 80, both hemispheres
333.7
2160
Male, age 61, both hemispheres
278.8
2172
Female, age 85, both hemispheres
275.0
Paramedian reticular nucleus nTPM: 422.0
2052
Male, age 76, both hemispheres
477.2
2057
Male, age 80, both hemispheres
437.2
2313
Male, age 61, both hemispheres
397.4
2050
Female, age 85, both hemispheres
376.2
Pedunculopontine tegmental nucleus nTPM: 436.9
2338
Male, age 61, both hemispheres
509.8
2334
Male, age 80, both hemispheres
453.7
1921
Female, age 85, both hemispheres
347.3
Pontine nuclei nTPM: 412.2
2319
Female, age 91, both hemispheres
482.0
1863
Male, age 55, unknown
467.3
2115
Male, age 80, left hemisphere
449.5
2454
Male, age 74, left hemisphere
414.3
1968
Male, age 76, left hemisphere
405.7
2109
Female, age 72, unknown
391.4
2787
Female, age 85, both hemispheres
381.4
2727
Male, age 61, right hemisphere
306.3
Pontine raphe nucleus nTPM: 379.1
2853
Male, age 76, midline
389.2
2122
Female, age 85, midline
368.9
Posteroventral cochlear nucleus nTPM: 518.2
2341
Male, age 80, both hemispheres
657.9
2135
Female, age 91, both hemispheres
606.9
2371
Male, age 61, both hemispheres
480.2
2070
Male, age 76, both hemispheres
436.0
2752
Female, age 85, both hemispheres
410.1
Principal sensory trigeminal nucleus nTPM: 337.6
2367
Female, age 91, left hemisphere
389.9
2324
Male, age 76, both hemispheres
340.4
2158
Male, age 61, both hemispheres
324.0
2008
Male, age 80, left hemisphere
296.2
Reticular pontine nucleus, caudal nTPM: 426.6
2457
Female, age 91, both hemispheres
495.1
2559
Male, age 74, both hemispheres
480.8
2092
Male, age 76, both hemispheres
447.8
2332
Male, age 80, right hemisphere
282.7
Reticular pontine nucleus, oral nTPM: 417.0
1939
Male, age 80, both hemispheres
458.6
2366
Female, age 91, both hemispheres
457.2
2167
Male, age 76, both hemispheres
425.9
2361
Male, age 74, both hemispheres
402.8
2012
Female, age 85, both hemispheres
340.7
Reticulotegmental nucleus nTPM: 411.0
2452
Male, age 74, both hemispheres
499.2
2322
Female, age 91, both hemispheres
408.9
2333
Male, age 80, both hemispheres
396.8
2325
Male, age 76, both hemispheres
339.3
Spinal trigeminal nucleus, oral nTPM: 386.3
2164
Male, age 80, both hemispheres
413.8
1978
Male, age 76, both hemispheres
382.9
2737
Female, age 85, both hemispheres
362.1
Subcoeruleus area nTPM: 450.4
2451
Male, age 74, both hemispheres
580.7
2369
Female, age 85, left hemisphere
496.9
1958
Male, age 80, both hemispheres
434.5
2323
Female, age 91, left hemisphere
372.6
2089
Male, age 76, left hemisphere
367.5
Superior olive nTPM: 360.5
2020
Male, age 76, both hemispheres
454.2
2561
Female, age 91, both hemispheres
387.8
2364
Male, age 74, right hemisphere
353.6
1875
Female, age 85, both hemispheres
306.6
2329
Male, age 80, right hemisphere
300.3
Ventral periolivary nuclei nTPM: 356.0
2023
Male, age 76, both hemispheres
439.6
2794
Female, age 91, left hemisphere
375.0
2165
Male, age 80, both hemispheres
357.9
2130
Female, age 85, both hemispheres
251.4
Ventrolateral tegmental area, A5 NE cell group nTPM: 376.7
2359
Male, age 61, both hemispheres
431.8
2161
Male, age 80, both hemispheres
403.0
1959
Male, age 76, both hemispheres
379.5
2456
Female, age 91, both hemispheres
371.9
2449
Male, age 74, both hemispheres
340.5
2840
Female, age 85, both hemispheres
333.9
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
