HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:27.3 nTPM
HPA Brain:8.0 nTPM
GTEx:27.3 nTPM
FANTOM5:55.3 Scaled Tags Per Million
Pig:1.6 nTPM
Mouse:95.1 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 8.0
Sample id Sample description nTPM
Hippocampus
nTPM: 6.6
1898 Male, age 80, left hemisphere 8.2
1855 Male, age 76, left hemisphere 7.1
1911 Female, age 85, right hemisphere 6.7
2621 Female, age 67, right hemisphere 6.0
2148 Female, age 91, left hemisphere 5.8
2529 Female, age 94, left hemisphere 5.4
Dentate gyrus
nTPM: 7.1
1927 Female, age 91, both hemispheres 9.0
2010 Male, age 76, both hemispheres 8.6
2530 Female, age 94, left hemisphere 6.6
2246 Female, age 85, both hemispheres 6.4
2528 Male, age 74, both hemispheres 6.2
2531 Female, age 67, both hemispheres 5.9
Entorhinal gyrus
nTPM: 6.2
1938 Female, age 85, left hemisphere 7.3
2613 Female, age 94, left hemisphere 6.9
1787 Male, age 76, left hemisphere 6.6
2764 Male, age 80, right hemisphere 6.1
2117 Female, age 91, right hemisphere 5.5
2686 Male, age 75, right hemisphere 4.8
Hippocampus, CA1
nTPM: 8.0
2749 Male, age 80, left hemisphere 11.8
1873 Female, age 85, both hemispheres 8.1
2045 Male, age 76, both hemispheres 7.8
2527 Male, age 74, both hemispheres 6.4
2082 Female, age 91, right hemisphere 5.8
Hippocampus, CA2
nTPM: 7.3
1892 Male, age 76, both hemispheres 11.1
1963 Male, age 80, left hemisphere 8.4
2249 Male, age 74, both hemispheres 6.4
2437 Female, age 94, left hemisphere 6.3
2113 Female, age 91, right hemisphere 6.2
1940 Female, age 85, left hemisphere 5.5
Hippocampus, CA3
nTPM: 7.4
2137 Male, age 80, left hemisphere 10.6
1867 Male, age 76, both hemispheres 8.5
1891 Female, age 85, both hemispheres 7.2
2620 Female, age 94, left hemisphere 6.5
2436 Male, age 74, both hemispheres 6.4
2861 Female, age 67, both hemispheres 4.9
Parahippocampal cortex
nTPM: 6.5
1850 Male, age 80, both hemispheres 7.2
2693 Female, age 94, both hemispheres 7.2
1933 Female, age 85, both hemispheres 7.1
1990 Female, age 91, right hemisphere 6.9
2250 Female, age 67, right hemisphere 6.7
2018 Male, age 76, both hemispheres 6.4
2245 Female, age 91, both hemispheres 6.3
2532 Female, age 72, left hemisphere 6.2
2692 Male, age 74, both hemispheres 5.6
2622 Female, age 67, right hemisphere 5.3
Perirhinal gyrus
nTPM: 7.2
1847 Female, age 91, left hemisphere 8.2
1841 Female, age 85, right hemisphere 7.9
1794 Male, age 80, right hemisphere 7.2
2848 Male, age 76, right hemisphere 6.7
2521 Female, age 94, right hemisphere 6.2
Subiculum
nTPM: 6.3
1901 Male, age 80, both hemispheres 8.1
1977 Female, age 85, both hemispheres 6.7
2042 Male, age 76, both hemispheres 6.0
2438 Female, age 94, left hemisphere 5.8
2729 Female, age 91, right hemisphere 5.7
2619 Male, age 74, both hemispheres 5.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 27.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 27.3
Samples: 197

Max nTPM: 66.0
Min nTPM: 12.9
Std nTPM: 10.8
Median nTPM: 24.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 66.0
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 59.8
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 57.0
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 55.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 55.3
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 53.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 51.8
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 50.5
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 50.0
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 49.2
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 49.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 55.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 55.3
FF:10169-103B7 60 years, female 72.7
FF:10153-102I9 76 years, female 38.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 1.6
Pig sample Sample description nTPM
Subiculum
nTPM: 1.4
Samples: 4

Max nTPM: 1.9
Min nTPM: 0.3
Sample A Female 1.6
Sample B Female 1.8
Sample C Male 0.3
Sample D Male 1.9
Dorsal hippocampus
nTPM: 1.6
Samples: 4

Max nTPM: 2.2
Min nTPM: 0.9
Sample A Female 0.9
Sample B Female 1.6
Sample C Male 2.2
Sample D Male 1.6
Entorhinal cortex
nTPM: 1.2
Samples: 4

Max nTPM: 1.7
Min nTPM: 0.9
Sample A Female 0.9
Sample B Female 1.1
Sample C Male 1.2
Sample D Male 1.7
Ventral hippocampus
nTPM: 1.0
Samples: 4

Max nTPM: 1.4
Min nTPM: 0.4
Sample A Female 1.4
Sample B Female 0.4
Sample C Male 1.3
Sample D Male 1.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 95.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 82.5
Samples: 4

Max nTPM: 90.9
Min nTPM: 73.9
Sample A Male 73.9
Sample B Male 85.6
Sample C Female 90.9
Sample D Female 79.5
Hippocampal formation
nTPM: 95.1
Samples: 4

Max nTPM: 108.3
Min nTPM: 89.4
Sample A Male 108.3
Sample B Male 89.4
Sample C Female 91.0
Sample D Female 91.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
70723589 Antisense, RP_050705_01_D07, Mouse strain C57BL/6J (56 days, male) 0.1

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