HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:30.5 nTPM
HPA Brain:21.0 nTPM
GTEx:30.5 nTPM
FANTOM5:34.9 Scaled Tags Per Million
Pig:0.1 nTPM
Mouse:0.0 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA055877
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 21.0
Sample id Sample description nTPM
Hippocampus
nTPM: 21.0
1855 Male, age 76, left hemisphere 29.4
1898 Male, age 80, left hemisphere 26.7
2621 Female, age 67, right hemisphere 23.2
2529 Female, age 94, left hemisphere 17.3
2148 Female, age 91, left hemisphere 14.7
1911 Female, age 85, right hemisphere 14.4
Dentate gyrus
nTPM: 15.1
2530 Female, age 94, left hemisphere 23.1
2246 Female, age 85, both hemispheres 15.7
2010 Male, age 76, both hemispheres 15.6
2531 Female, age 67, both hemispheres 13.8
2528 Male, age 74, both hemispheres 11.4
1927 Female, age 91, both hemispheres 10.9
Entorhinal gyrus
nTPM: 13.9
2117 Female, age 91, right hemisphere 21.1
2613 Female, age 94, left hemisphere 16.2
1787 Male, age 76, left hemisphere 13.1
2764 Male, age 80, right hemisphere 11.2
1938 Female, age 85, left hemisphere 11.0
2686 Male, age 75, right hemisphere 10.6
Hippocampus, CA1
nTPM: 14.0
2045 Male, age 76, both hemispheres 17.9
2527 Male, age 74, both hemispheres 13.8
2082 Female, age 91, right hemisphere 13.6
1873 Female, age 85, both hemispheres 12.5
2749 Male, age 80, left hemisphere 12.1
Hippocampus, CA2
nTPM: 17.2
1940 Female, age 85, left hemisphere 28.8
1892 Male, age 76, both hemispheres 18.1
2437 Female, age 94, left hemisphere 17.6
1963 Male, age 80, left hemisphere 14.9
2113 Female, age 91, right hemisphere 13.1
2249 Male, age 74, both hemispheres 11.0
Hippocampus, CA3
nTPM: 12.7
1867 Male, age 76, both hemispheres 18.9
1891 Female, age 85, both hemispheres 13.6
2137 Male, age 80, left hemisphere 12.0
2861 Female, age 67, both hemispheres 11.7
2436 Male, age 74, both hemispheres 10.9
2620 Female, age 94, left hemisphere 9.1
Parahippocampal cortex
nTPM: 15.2
2018 Male, age 76, both hemispheres 23.7
2250 Female, age 67, right hemisphere 23.2
2532 Female, age 72, left hemisphere 17.4
2245 Female, age 91, both hemispheres 14.2
2622 Female, age 67, right hemisphere 13.7
1850 Male, age 80, both hemispheres 13.6
2693 Female, age 94, both hemispheres 13.2
2692 Male, age 74, both hemispheres 11.9
1933 Female, age 85, both hemispheres 10.8
1990 Female, age 91, right hemisphere 9.9
Perirhinal gyrus
nTPM: 12.8
2521 Female, age 94, right hemisphere 15.9
1794 Male, age 80, right hemisphere 15.0
2848 Male, age 76, right hemisphere 14.1
1847 Female, age 91, left hemisphere 9.6
1841 Female, age 85, right hemisphere 9.5
Subiculum
nTPM: 21.0
2042 Male, age 76, both hemispheres 29.8
2438 Female, age 94, left hemisphere 26.1
2729 Female, age 91, right hemisphere 22.0
1901 Male, age 80, both hemispheres 19.3
2619 Male, age 74, both hemispheres 18.0
1977 Female, age 85, both hemispheres 10.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 30.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 30.5
Samples: 197

Max nTPM: 137.6
Min nTPM: 2.0
Std nTPM: 22.8
Median nTPM: 25.1
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 137.6
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 118.9
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 107.1
GTEX-1GN1U-0011-R1a-SM-CJI25 50-59 years, female 106.3
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 100.6
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 92.0
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 86.2
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 84.3
GTEX-131YS-0011-R1a-SM-5DUXC 60-69 years, female 79.4
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 76.8
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 72.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 34.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 34.9
FF:10169-103B7 60 years, female 47.7
FF:10153-102I9 76 years, female 22.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 0.1
Pig sample Sample description nTPM
Subiculum
nTPM: 0.1
Samples: 4

Max nTPM: 0.2
Min nTPM: 0.0
Sample A Female 0.0
Sample B Female 0.2
Sample C Male 0.0
Sample D Male 0.1
Dorsal hippocampus
nTPM: 0.0
Samples: 4

Max nTPM: 0.1
Min nTPM: 0.0
Sample A Female 0.1
Sample B Female 0.0
Sample C Male 0.0
Sample D Male 0.0
Entorhinal cortex
nTPM: 0.0
Samples: 4

Max nTPM: 0.1
Min nTPM: 0.0
Sample A Female 0.0
Sample B Female 0.0
Sample C Male 0.1
Sample D Male 0.0
Ventral hippocampus
nTPM: 0.0
Samples: 4

Max nTPM: 0.1
Min nTPM: 0.0
Sample A Female 0.1
Sample B Female 0.0
Sample C Male 0.0
Sample D Male 0.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 0.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 0.0
Samples: 4

Max nTPM: 0.0
Min nTPM: 0.0
Sample A Male 0.0
Sample B Male 0.0
Sample C Female 0.0
Sample D Female 0.0
Hippocampal formation
nTPM: 0.0
Samples: 4

Max nTPM: 0.0
Min nTPM: 0.0
Sample A Male 0.0
Sample B Male 0.0
Sample C Female 0.0
Sample D Female 0.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
68632196 Antisense, RP_050125_01_H05, Mouse strain C57BL/6J (56 days, male) 0.2

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