HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:38.2 nTPM
HPA Brain:36.3 nTPM
GTEx:38.2 nTPM
FANTOM5:32.5 Scaled Tags Per Million
Pig:23.9 nTPM
Mouse:9.4 nTPM
Allen mouse:2.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA052967
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 36.3
Sample id Sample description nTPM
Hippocampus
nTPM: 31.5
2529 Female, age 94, left hemisphere 34.2
1855 Male, age 76, left hemisphere 33.6
2621 Female, age 67, right hemisphere 33.5
1898 Male, age 80, left hemisphere 31.9
2148 Female, age 91, left hemisphere 30.9
1911 Female, age 85, right hemisphere 24.9
Dentate gyrus
nTPM: 27.4
2531 Female, age 67, both hemispheres 33.5
2530 Female, age 94, left hemisphere 32.1
2528 Male, age 74, both hemispheres 27.5
2246 Female, age 85, both hemispheres 24.7
2010 Male, age 76, both hemispheres 23.9
1927 Female, age 91, both hemispheres 22.6
Entorhinal gyrus
nTPM: 36.3
2117 Female, age 91, right hemisphere 41.2
2686 Male, age 75, right hemisphere 39.8
2764 Male, age 80, right hemisphere 36.0
1787 Male, age 76, left hemisphere 35.9
1938 Female, age 85, left hemisphere 32.9
2613 Female, age 94, left hemisphere 32.0
Hippocampus, CA1
nTPM: 25.5
2749 Male, age 80, left hemisphere 27.0
2527 Male, age 74, both hemispheres 26.7
1873 Female, age 85, both hemispheres 25.3
2082 Female, age 91, right hemisphere 25.0
2045 Male, age 76, both hemispheres 23.6
Hippocampus, CA2
nTPM: 26.3
2113 Female, age 91, right hemisphere 29.6
2437 Female, age 94, left hemisphere 29.6
1963 Male, age 80, left hemisphere 28.3
1940 Female, age 85, left hemisphere 26.5
1892 Male, age 76, both hemispheres 21.9
2249 Male, age 74, both hemispheres 21.8
Hippocampus, CA3
nTPM: 27.6
2861 Female, age 67, both hemispheres 47.2
2620 Female, age 94, left hemisphere 26.6
1867 Male, age 76, both hemispheres 25.0
1891 Female, age 85, both hemispheres 23.7
2137 Male, age 80, left hemisphere 21.6
2436 Male, age 74, both hemispheres 21.5
Parahippocampal cortex
nTPM: 34.0
2622 Female, age 67, right hemisphere 50.8
2245 Female, age 91, both hemispheres 36.0
2532 Female, age 72, left hemisphere 35.2
2018 Male, age 76, both hemispheres 33.7
2693 Female, age 94, both hemispheres 32.8
2692 Male, age 74, both hemispheres 32.7
2250 Female, age 67, right hemisphere 31.2
1850 Male, age 80, both hemispheres 30.6
1933 Female, age 85, both hemispheres 29.8
1990 Female, age 91, right hemisphere 27.7
Perirhinal gyrus
nTPM: 32.0
2848 Male, age 76, right hemisphere 35.4
1794 Male, age 80, right hemisphere 33.7
2521 Female, age 94, right hemisphere 31.1
1841 Female, age 85, right hemisphere 30.8
1847 Female, age 91, left hemisphere 28.8
Subiculum
nTPM: 27.3
2619 Male, age 74, both hemispheres 33.2
2729 Female, age 91, right hemisphere 30.2
1977 Female, age 85, both hemispheres 27.4
2042 Male, age 76, both hemispheres 24.9
1901 Male, age 80, both hemispheres 24.1
2438 Female, age 94, left hemisphere 23.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 38.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 38.2
Samples: 197

Max nTPM: 80.4
Min nTPM: 16.5
Std nTPM: 13.1
Median nTPM: 35.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 80.4
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 77.0
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 75.4
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 74.1
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 68.9
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 68.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 67.2
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 66.8
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 66.2
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 65.3
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 65.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 32.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 32.5
FF:10153-102I9 76 years, female 41.2
FF:10169-103B7 60 years, female 23.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 23.9
Pig sample Sample description nTPM
Subiculum
nTPM: 19.4
Samples: 4

Max nTPM: 25.6
Min nTPM: 15.1
Sample A Female 25.6
Sample B Female 15.4
Sample C Male 21.6
Sample D Male 15.1
Dorsal hippocampus
nTPM: 20.6
Samples: 4

Max nTPM: 24.1
Min nTPM: 16.1
Sample A Female 24.1
Sample B Female 18.5
Sample C Male 23.8
Sample D Male 16.1
Entorhinal cortex
nTPM: 21.3
Samples: 4

Max nTPM: 24.1
Min nTPM: 17.4
Sample A Female 21.2
Sample B Female 24.1
Sample C Male 22.5
Sample D Male 17.4
Ventral hippocampus
nTPM: 23.9
Samples: 4

Max nTPM: 33.5
Min nTPM: 19.0
Sample A Female 21.2
Sample B Female 19.0
Sample C Male 33.5
Sample D Male 21.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 9.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 9.4
Samples: 4

Max nTPM: 10.3
Min nTPM: 8.1
Sample A Male 10.3
Sample B Male 8.1
Sample C Female 9.9
Sample D Female 9.2
Hippocampal formation
nTPM: 9.3
Samples: 4

Max nTPM: 10.8
Min nTPM: 7.5
Sample A Male 9.9
Sample B Male 7.5
Sample C Female 9.1
Sample D Female 10.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.0
69981175 Antisense, RP_050512_04_G11, Mouse strain C57BL/6J (56 days, male) 2.0

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