HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:94.0 nTPM
HPA Brain:52.1 nTPM
GTEx:94.0 nTPM
FANTOM5:22.7 Scaled Tags Per Million
Pig:33.5 nTPM
Mouse:40.6 nTPM
Allen mouse:5.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA057067
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 52.1
Sample id Sample description nTPM
Hippocampus
nTPM: 52.1
1855 Male, age 76, left hemisphere 60.4
2529 Female, age 94, left hemisphere 53.2
2621 Female, age 67, right hemisphere 52.8
1898 Male, age 80, left hemisphere 51.8
2148 Female, age 91, left hemisphere 49.0
1911 Female, age 85, right hemisphere 45.2
Dentate gyrus
nTPM: 45.9
2530 Female, age 94, left hemisphere 58.9
2010 Male, age 76, both hemispheres 47.9
2531 Female, age 67, both hemispheres 46.7
1927 Female, age 91, both hemispheres 43.2
2528 Male, age 74, both hemispheres 42.7
2246 Female, age 85, both hemispheres 36.1
Entorhinal gyrus
nTPM: 51.5
2686 Male, age 75, right hemisphere 67.9
1938 Female, age 85, left hemisphere 49.1
2613 Female, age 94, left hemisphere 48.8
2764 Male, age 80, right hemisphere 48.6
1787 Male, age 76, left hemisphere 47.3
2117 Female, age 91, right hemisphere 47.1
Hippocampus, CA1
nTPM: 49.3
1873 Female, age 85, both hemispheres 54.0
2749 Male, age 80, left hemisphere 53.7
2045 Male, age 76, both hemispheres 48.3
2082 Female, age 91, right hemisphere 46.5
2527 Male, age 74, both hemispheres 44.2
Hippocampus, CA2
nTPM: 46.5
1963 Male, age 80, left hemisphere 64.0
1892 Male, age 76, both hemispheres 52.3
2437 Female, age 94, left hemisphere 45.8
2113 Female, age 91, right hemisphere 43.2
2249 Male, age 74, both hemispheres 38.9
1940 Female, age 85, left hemisphere 35.1
Hippocampus, CA3
nTPM: 49.4
2861 Female, age 67, both hemispheres 68.1
2137 Male, age 80, left hemisphere 48.2
1867 Male, age 76, both hemispheres 47.8
2620 Female, age 94, left hemisphere 47.8
1891 Female, age 85, both hemispheres 46.0
2436 Male, age 74, both hemispheres 38.5
Parahippocampal cortex
nTPM: 43.4
2692 Male, age 74, both hemispheres 55.2
2622 Female, age 67, right hemisphere 47.8
2018 Male, age 76, both hemispheres 46.2
1933 Female, age 85, both hemispheres 45.1
2245 Female, age 91, both hemispheres 43.7
1850 Male, age 80, both hemispheres 42.3
2693 Female, age 94, both hemispheres 41.9
2532 Female, age 72, left hemisphere 40.0
1990 Female, age 91, right hemisphere 37.9
2250 Female, age 67, right hemisphere 33.5
Perirhinal gyrus
nTPM: 41.8
1847 Female, age 91, left hemisphere 46.0
1841 Female, age 85, right hemisphere 43.1
2848 Male, age 76, right hemisphere 41.8
1794 Male, age 80, right hemisphere 41.0
2521 Female, age 94, right hemisphere 37.1
Subiculum
nTPM: 43.4
2042 Male, age 76, both hemispheres 52.1
1901 Male, age 80, both hemispheres 48.0
2619 Male, age 74, both hemispheres 48.0
2729 Female, age 91, right hemisphere 40.2
1977 Female, age 85, both hemispheres 38.6
2438 Female, age 94, left hemisphere 33.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 94.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 94.0
Samples: 197

Max nTPM: 241.7
Min nTPM: 27.6
Std nTPM: 35.1
Median nTPM: 87.7
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 241.7
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 216.9
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 200.4
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 190.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 169.2
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 168.8
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 168.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 165.4
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 162.9
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 162.6
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 162.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 22.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 22.7
FF:10153-102I9 76 years, female 23.7
FF:10169-103B7 60 years, female 21.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 33.5
Pig sample Sample description nTPM
Subiculum
nTPM: 32.4
Samples: 4

Max nTPM: 39.4
Min nTPM: 28.0
Sample A Female 39.4
Sample B Female 28.0
Sample C Male 31.0
Sample D Male 31.2
Dorsal hippocampus
nTPM: 33.5
Samples: 4

Max nTPM: 42.7
Min nTPM: 22.3
Sample A Female 42.7
Sample B Female 30.3
Sample C Male 38.8
Sample D Male 22.3
Entorhinal cortex
nTPM: 32.9
Samples: 4

Max nTPM: 42.7
Min nTPM: 24.5
Sample A Female 30.1
Sample B Female 34.4
Sample C Male 42.7
Sample D Male 24.5
Ventral hippocampus
nTPM: 32.9
Samples: 4

Max nTPM: 40.6
Min nTPM: 25.4
Sample A Female 33.0
Sample B Female 25.4
Sample C Male 40.6
Sample D Male 32.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 40.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 30.5
Samples: 4

Max nTPM: 34.3
Min nTPM: 23.6
Sample A Male 34.3
Sample B Male 23.6
Sample C Female 34.0
Sample D Female 30.0
Hippocampal formation
nTPM: 40.6
Samples: 4

Max nTPM: 46.0
Min nTPM: 35.2
Sample A Male 35.2
Sample B Male 40.7
Sample C Female 46.0
Sample D Female 40.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.6
69080018 Antisense, RP_050324_01_D08, Mouse strain C57BL/6J (56 days, male) 5.6

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