HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:395.6 nTPM
HPA Brain:438.5 nTPM
GTEx:395.6 nTPM
FANTOM5:740.2 Scaled Tags Per Million
Pig:499.4 nTPM
Mouse:354.5 nTPM
Allen mouse:2.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA003868Antibody CAB005284
Glial cells Not detectedNot detected
Neuronal cells LowHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 438.5
Sample id Sample description nTPM
Hippocampus
nTPM: 353.1
1898 Male, age 80, left hemisphere 439.1
2529 Female, age 94, left hemisphere 366.8
2621 Female, age 67, right hemisphere 362.9
1911 Female, age 85, right hemisphere 350.8
1855 Male, age 76, left hemisphere 327.0
2148 Female, age 91, left hemisphere 272.3
Dentate gyrus
nTPM: 385.8
2530 Female, age 94, left hemisphere 520.6
2010 Male, age 76, both hemispheres 425.3
1927 Female, age 91, both hemispheres 374.5
2246 Female, age 85, both hemispheres 355.1
2528 Male, age 74, both hemispheres 322.8
2531 Female, age 67, both hemispheres 316.3
Entorhinal gyrus
nTPM: 285.5
2764 Male, age 80, right hemisphere 394.4
1787 Male, age 76, left hemisphere 335.5
1938 Female, age 85, left hemisphere 293.7
2117 Female, age 91, right hemisphere 264.7
2613 Female, age 94, left hemisphere 257.9
2686 Male, age 75, right hemisphere 166.9
Hippocampus, CA1
nTPM: 438.5
2749 Male, age 80, left hemisphere 707.4
2527 Male, age 74, both hemispheres 497.8
2082 Female, age 91, right hemisphere 360.4
2045 Male, age 76, both hemispheres 332.2
1873 Female, age 85, both hemispheres 294.8
Hippocampus, CA2
nTPM: 376.5
2249 Male, age 74, both hemispheres 494.5
1963 Male, age 80, left hemisphere 453.0
2437 Female, age 94, left hemisphere 354.3
1892 Male, age 76, both hemispheres 351.0
2113 Female, age 91, right hemisphere 327.2
1940 Female, age 85, left hemisphere 279.1
Hippocampus, CA3
nTPM: 373.1
2137 Male, age 80, left hemisphere 581.8
2436 Male, age 74, both hemispheres 528.7
1867 Male, age 76, both hemispheres 341.9
2861 Female, age 67, both hemispheres 279.2
2620 Female, age 94, left hemisphere 272.2
1891 Female, age 85, both hemispheres 235.2
Parahippocampal cortex
nTPM: 293.9
2245 Female, age 91, both hemispheres 442.6
2250 Female, age 67, right hemisphere 372.7
2018 Male, age 76, both hemispheres 348.2
2532 Female, age 72, left hemisphere 341.2
1990 Female, age 91, right hemisphere 301.5
1933 Female, age 85, both hemispheres 286.5
1850 Male, age 80, both hemispheres 270.7
2622 Female, age 67, right hemisphere 218.6
2693 Female, age 94, both hemispheres 192.6
2692 Male, age 74, both hemispheres 164.2
Perirhinal gyrus
nTPM: 354.5
2521 Female, age 94, right hemisphere 437.8
1794 Male, age 80, right hemisphere 403.3
1847 Female, age 91, left hemisphere 392.6
1841 Female, age 85, right hemisphere 295.7
2848 Male, age 76, right hemisphere 243.3
Subiculum
nTPM: 291.5
1901 Male, age 80, both hemispheres 345.6
1977 Female, age 85, both hemispheres 341.3
2438 Female, age 94, left hemisphere 290.6
2042 Male, age 76, both hemispheres 289.1
2619 Male, age 74, both hemispheres 262.8
2729 Female, age 91, right hemisphere 219.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 395.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 395.6
Samples: 197

Max nTPM: 1062.1
Min nTPM: 79.4
Std nTPM: 164.4
Median nTPM: 371.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 1062.1
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 958.5
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 929.5
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 900.9
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 832.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 780.3
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 742.7
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 738.6
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 720.4
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 712.6
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 692.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 740.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 740.2
FF:10169-103B7 60 years, female 1091.5
FF:10153-102I9 76 years, female 388.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 499.4
Pig sample Sample description nTPM
Subiculum
nTPM: 467.4
Samples: 4

Max nTPM: 617.1
Min nTPM: 414.4
Sample A Female 617.1
Sample B Female 415.2
Sample C Male 414.4
Sample D Male 422.9
Dorsal hippocampus
nTPM: 499.4
Samples: 4

Max nTPM: 701.9
Min nTPM: 386.6
Sample A Female 701.9
Sample B Female 448.4
Sample C Male 460.6
Sample D Male 386.6
Entorhinal cortex
nTPM: 437.4
Samples: 4

Max nTPM: 489.7
Min nTPM: 362.3
Sample A Female 489.7
Sample B Female 466.1
Sample C Male 431.3
Sample D Male 362.3
Ventral hippocampus
nTPM: 490.6
Samples: 4

Max nTPM: 594.1
Min nTPM: 314.0
Sample A Female 559.8
Sample B Female 314.0
Sample C Male 594.1
Sample D Male 494.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 354.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 354.5
Samples: 4

Max nTPM: 385.4
Min nTPM: 321.0
Sample A Male 351.7
Sample B Male 385.4
Sample C Female 321.0
Sample D Female 359.7
Hippocampal formation
nTPM: 332.6
Samples: 4

Max nTPM: 398.1
Min nTPM: 290.0
Sample A Male 317.2
Sample B Male 325.1
Sample C Female 290.0
Sample D Female 398.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.6
2407 Antisense, RP_Baylor_102906, Mouse strain C57BL/6J (56 days, male) 2.6
2408 Antisense, RP_Baylor_102906, Mouse strain C57BL/6J (56 days, male) 0.8

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