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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
384.1
nTPM
FANTOM5:
801.3
Scaled Tags Per Million
Pig:
643.1
nTPM
Allen mouse:
2.2
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
384.1
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 325.5
2301
Female, age 85, both hemispheres
388.7
2188
Female, age 91, both hemispheres
337.1
2090
Male, age 80, both hemispheres
328.5
1984
Male, age 76, both hemispheres
247.7
Dorsal cochlear nucleus nTPM: 276.6
2187
Female, age 91, both hemispheres
411.9
2058
Male, age 76, both hemispheres
296.6
2370
Male, age 61, both hemispheres
252.8
2802
Male, age 74, right hemisphere
225.2
2378
Male, age 80, both hemispheres
196.8
Dorsal tegmental nucleus nTPM: 336.6
2358
Male, age 61, both hemispheres
391.0
2083
Male, age 80, both hemispheres
359.3
2326
Male, age 74, both hemispheres
326.3
1936
Male, age 76, left hemisphere
269.9
Dorsolateral tegmental area nTPM: 331.3
2337
Male, age 61, both hemispheres
384.8
2751
Female, age 85, both hemispheres
357.4
2654
Male, age 80, both hemispheres
324.5
2141
Male, age 76, both hemispheres
303.1
2360
Male, age 74, both hemispheres
286.8
Kolliker-Fuse nucleus nTPM: 334.4
2163
Male, age 80, both hemispheres
383.8
2315
Male, age 76, right hemisphere
316.5
2793
Female, age 91, left hemisphere
303.0
Lateral lemniscal nuclei nTPM: 273.2
2169
Male, age 76, both hemispheres
291.7
2746
Female, age 85, left hemisphere
290.5
2036
Male, age 80, both hemispheres
269.6
2320
Female, age 91, left hemisphere
258.7
2453
Male, age 74, right hemisphere
255.7
Lateral parabrachial nucleus nTPM: 271.6
2139
Female, age 85, right hemisphere
331.4
2013
Male, age 80, both hemispheres
281.3
2790
Male, age 61, both hemispheres
249.4
2792
Male, age 76, both hemispheres
224.2
Lateral vestibular nucleus nTPM: 376.0
2311
Male, age 80, both hemispheres
393.2
2184
Male, age 76, both hemispheres
358.7
Locus coeruleus nTPM: 380.3
2123
Female, age 91, both hemispheres
505.5
2014
Male, age 55, unknown
468.1
1980
Male, age 76, both hemispheres
415.5
2720
Male, age 74, both hemispheres
368.8
2162
Male, age 80, both hemispheres
354.8
2317
Female, age 72, unknown
316.0
2788
Male, age 74, unknown
233.1
Medial parabrachial nucleus nTPM: 384.1
2170
Female, age 91, both hemispheres
618.8
2156
Male, age 61, both hemispheres
345.5
2463
Female, age 85, right hemisphere
336.9
2854
Male, age 80, both hemispheres
336.8
2786
Male, age 76, both hemispheres
282.4
Medial periolivary nuclei nTPM: 284.9
2171
Female, age 85, both hemispheres
320.8
2063
Male, age 76, both hemispheres
304.9
2791
Male, age 74, right hemisphere
272.5
2081
Male, age 80, both hemispheres
271.0
2458
Female, age 91, both hemispheres
255.2
Motor facial nucleus nTPM: 276.1
2365
Male, age 74, right hemisphere
353.8
2062
Male, age 76, both hemispheres
345.7
2126
Male, age 61, both hemispheres
308.8
2697
Female, age 85, both hemispheres
232.0
2327
Male, age 80, both hemispheres
217.8
2795
Female, age 91, both hemispheres
198.3
Motor trigeminal nucleus nTPM: 285.0
2335
Male, age 61, both hemispheres
331.3
2321
Female, age 91, both hemispheres
320.1
2560
Male, age 74, both hemispheres
259.0
2079
Male, age 80, both hemispheres
258.5
2309
Male, age 76, both hemispheres
255.9
Nuclei of the trapezoid body nTPM: 304.1
1983
Male, age 76, both hemispheres
361.5
2159
Male, age 61, both hemispheres
356.7
2166
Male, age 80, both hemispheres
307.2
2735
Female, age 85, both hemispheres
297.4
2368
Female, age 91, both hemispheres
197.8
Nucleus raphe magnus nTPM: 320.2
2160
Male, age 61, both hemispheres
397.4
2455
Male, age 74, both hemispheres
393.6
2172
Female, age 85, both hemispheres
317.2
2051
Male, age 76, both hemispheres
278.6
2328
Male, age 80, both hemispheres
272.1
2459
Female, age 91, both hemispheres
262.3
Paramedian reticular nucleus nTPM: 297.5
2057
Male, age 80, both hemispheres
354.4
2313
Male, age 61, both hemispheres
351.1
2050
Female, age 85, both hemispheres
284.4
2052
Male, age 76, both hemispheres
199.9
Pedunculopontine tegmental nucleus nTPM: 309.0
2334
Male, age 80, both hemispheres
339.8
2338
Male, age 61, both hemispheres
306.4
1921
Female, age 85, both hemispheres
280.9
Pontine nuclei nTPM: 347.6
1863
Male, age 55, unknown
417.6
2109
Female, age 72, unknown
408.3
2454
Male, age 74, left hemisphere
369.3
2787
Female, age 85, both hemispheres
363.8
1968
Male, age 76, left hemisphere
331.2
2727
Male, age 61, right hemisphere
310.6
2319
Female, age 91, both hemispheres
294.7
2115
Male, age 80, left hemisphere
285.4
Pontine raphe nucleus nTPM: 290.0
2122
Female, age 85, midline
308.3
2853
Male, age 76, midline
271.6
Posteroventral cochlear nucleus nTPM: 300.2
2752
Female, age 85, both hemispheres
358.8
2070
Male, age 76, both hemispheres
324.7
2341
Male, age 80, both hemispheres
303.8
2135
Female, age 91, both hemispheres
280.0
2371
Male, age 61, both hemispheres
233.6
Principal sensory trigeminal nucleus nTPM: 298.4
2158
Male, age 61, both hemispheres
341.2
2324
Male, age 76, both hemispheres
339.1
2367
Female, age 91, left hemisphere
279.0
2008
Male, age 80, left hemisphere
234.4
Reticular pontine nucleus, caudal nTPM: 287.7
2092
Male, age 76, both hemispheres
321.4
2559
Male, age 74, both hemispheres
319.6
2457
Female, age 91, both hemispheres
259.2
2332
Male, age 80, right hemisphere
250.7
Reticular pontine nucleus, oral nTPM: 303.4
2361
Male, age 74, both hemispheres
364.3
2167
Male, age 76, both hemispheres
320.3
1939
Male, age 80, both hemispheres
304.1
2012
Female, age 85, both hemispheres
281.5
2366
Female, age 91, both hemispheres
246.7
Reticulotegmental nucleus nTPM: 316.0
2322
Female, age 91, both hemispheres
351.4
2452
Male, age 74, both hemispheres
322.2
2333
Male, age 80, both hemispheres
302.9
2325
Male, age 76, both hemispheres
287.7
Spinal trigeminal nucleus, oral nTPM: 330.7
2164
Male, age 80, both hemispheres
374.5
2737
Female, age 85, both hemispheres
317.1
1978
Male, age 76, both hemispheres
300.6
Subcoeruleus area nTPM: 301.5
2323
Female, age 91, left hemisphere
340.0
2451
Male, age 74, both hemispheres
318.9
2369
Female, age 85, left hemisphere
309.1
1958
Male, age 80, both hemispheres
291.6
2089
Male, age 76, left hemisphere
248.2
Superior olive nTPM: 262.3
2364
Male, age 74, right hemisphere
347.5
2329
Male, age 80, right hemisphere
268.5
2020
Male, age 76, both hemispheres
245.2
2561
Female, age 91, both hemispheres
234.7
1875
Female, age 85, both hemispheres
215.9
Ventral periolivary nuclei nTPM: 264.0
2165
Male, age 80, both hemispheres
321.2
2130
Female, age 85, both hemispheres
299.5
2023
Male, age 76, both hemispheres
239.0
2794
Female, age 91, left hemisphere
196.4
Ventrolateral tegmental area, A5 NE cell group nTPM: 272.7
2449
Male, age 74, both hemispheres
303.3
2840
Female, age 85, both hemispheres
293.6
2161
Male, age 80, both hemispheres
290.1
2359
Male, age 61, both hemispheres
275.6
1959
Male, age 76, both hemispheres
252.7
2456
Female, age 91, both hemispheres
221.2
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
643.1
Pig sample
Sample description
nTPM
Pons nTPM: 643.1
Samples: 4
Max nTPM: 831.6
Min nTPM: 433.6
Sample A
Female
831.6
Sample B
Female
433.6
Sample C
Male
621.0
Sample D
Male
686.3
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
