HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:48.2 nTPM
HPA Brain:31.3 nTPM
GTEx:48.2 nTPM
FANTOM5:41.2 Scaled Tags Per Million
Pig:34.4 nTPM
Mouse:86.8 nTPM
Allen mouse:1.7 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 31.3
Sample id Sample description nTPM
Hippocampus
nTPM: 27.4
1898 Male, age 80, left hemisphere 39.7
1855 Male, age 76, left hemisphere 32.8
1911 Female, age 85, right hemisphere 29.2
2529 Female, age 94, left hemisphere 23.3
2621 Female, age 67, right hemisphere 20.5
2148 Female, age 91, left hemisphere 19.0
Dentate gyrus
nTPM: 26.5
2010 Male, age 76, both hemispheres 36.2
1927 Female, age 91, both hemispheres 32.3
2246 Female, age 85, both hemispheres 25.4
2530 Female, age 94, left hemisphere 25.2
2528 Male, age 74, both hemispheres 20.8
2531 Female, age 67, both hemispheres 18.9
Entorhinal gyrus
nTPM: 22.7
1938 Female, age 85, left hemisphere 28.8
2117 Female, age 91, right hemisphere 23.6
2613 Female, age 94, left hemisphere 22.5
1787 Male, age 76, left hemisphere 21.6
2686 Male, age 75, right hemisphere 20.1
2764 Male, age 80, right hemisphere 19.8
Hippocampus, CA1
nTPM: 31.3
2749 Male, age 80, left hemisphere 44.5
1873 Female, age 85, both hemispheres 37.0
2045 Male, age 76, both hemispheres 31.8
2082 Female, age 91, right hemisphere 21.9
2527 Male, age 74, both hemispheres 21.2
Hippocampus, CA2
nTPM: 28.6
1892 Male, age 76, both hemispheres 35.8
1963 Male, age 80, left hemisphere 34.2
1940 Female, age 85, left hemisphere 30.6
2437 Female, age 94, left hemisphere 25.2
2249 Male, age 74, both hemispheres 23.3
2113 Female, age 91, right hemisphere 22.1
Hippocampus, CA3
nTPM: 28.0
1867 Male, age 76, both hemispheres 39.7
2137 Male, age 80, left hemisphere 39.4
1891 Female, age 85, both hemispheres 29.9
2436 Male, age 74, both hemispheres 22.9
2861 Female, age 67, both hemispheres 18.7
2620 Female, age 94, left hemisphere 17.6
Parahippocampal cortex
nTPM: 24.3
2018 Male, age 76, both hemispheres 30.8
1933 Female, age 85, both hemispheres 29.3
2250 Female, age 67, right hemisphere 29.0
2693 Female, age 94, both hemispheres 28.1
1850 Male, age 80, both hemispheres 27.3
1990 Female, age 91, right hemisphere 22.9
2245 Female, age 91, both hemispheres 22.1
2692 Male, age 74, both hemispheres 21.4
2532 Female, age 72, left hemisphere 20.1
2622 Female, age 67, right hemisphere 12.4
Perirhinal gyrus
nTPM: 27.9
1841 Female, age 85, right hemisphere 36.2
1847 Female, age 91, left hemisphere 27.5
2848 Male, age 76, right hemisphere 26.2
1794 Male, age 80, right hemisphere 25.0
2521 Female, age 94, right hemisphere 24.8
Subiculum
nTPM: 24.4
1901 Male, age 80, both hemispheres 33.7
2042 Male, age 76, both hemispheres 32.1
1977 Female, age 85, both hemispheres 25.1
2729 Female, age 91, right hemisphere 21.4
2438 Female, age 94, left hemisphere 20.3
2619 Male, age 74, both hemispheres 13.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 48.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 48.2
Samples: 197

Max nTPM: 111.2
Min nTPM: 20.2
Std nTPM: 13.2
Median nTPM: 45.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 111.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 104.2
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 85.8
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 84.8
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 82.5
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 79.6
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 76.2
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 74.2
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 74.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 74.0
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 72.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 41.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 41.2
FF:10169-103B7 60 years, female 57.1
FF:10153-102I9 76 years, female 25.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 34.4
Pig sample Sample description nTPM
Subiculum
nTPM: 26.9
Samples: 4

Max nTPM: 31.4
Min nTPM: 23.0
Sample A Female 31.4
Sample B Female 23.0
Sample C Male 23.5
Sample D Male 29.5
Dorsal hippocampus
nTPM: 34.4
Samples: 4

Max nTPM: 41.9
Min nTPM: 29.2
Sample A Female 41.9
Sample B Female 30.5
Sample C Male 36.0
Sample D Male 29.2
Entorhinal cortex
nTPM: 22.8
Samples: 4

Max nTPM: 26.0
Min nTPM: 16.7
Sample A Female 23.9
Sample B Female 24.4
Sample C Male 26.0
Sample D Male 16.7
Ventral hippocampus
nTPM: 26.0
Samples: 4

Max nTPM: 32.6
Min nTPM: 22.3
Sample A Female 26.0
Sample B Female 22.3
Sample C Male 22.9
Sample D Male 32.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 86.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 62.3
Samples: 4

Max nTPM: 66.9
Min nTPM: 56.3
Sample A Male 66.9
Sample B Male 61.5
Sample C Female 64.5
Sample D Female 56.3
Hippocampal formation
nTPM: 86.8
Samples: 4

Max nTPM: 101.9
Min nTPM: 76.5
Sample A Male 101.9
Sample B Male 79.4
Sample C Female 89.5
Sample D Female 76.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.7
71280814 Antisense, RP_050818_01_F07, Mouse strain C57BL/6J (56 days, male) 1.7

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