HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:112.3 nTPM
HPA Brain:127.4 nTPM
GTEx:112.3 nTPM
FANTOM5:45.2 Scaled Tags Per Million
Pig:30.5 nTPM
Mouse:5.8 nTPM
Allen mouse:0.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA052447
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 127.4
Sample id Sample description nTPM
Hippocampus
nTPM: 115.6
1898 Male, age 80, left hemisphere 148.9
2621 Female, age 67, right hemisphere 123.4
2529 Female, age 94, left hemisphere 115.8
1911 Female, age 85, right hemisphere 110.1
1855 Male, age 76, left hemisphere 105.3
2148 Female, age 91, left hemisphere 90.3
Dentate gyrus
nTPM: 120.4
2530 Female, age 94, left hemisphere 176.5
2010 Male, age 76, both hemispheres 148.2
1927 Female, age 91, both hemispheres 111.2
2528 Male, age 74, both hemispheres 104.2
2531 Female, age 67, both hemispheres 97.5
2246 Female, age 85, both hemispheres 85.1
Entorhinal gyrus
nTPM: 127.4
2117 Female, age 91, right hemisphere 157.5
2764 Male, age 80, right hemisphere 146.9
2613 Female, age 94, left hemisphere 120.7
1938 Female, age 85, left hemisphere 120.6
1787 Male, age 76, left hemisphere 117.3
2686 Male, age 75, right hemisphere 101.5
Hippocampus, CA1
nTPM: 108.8
2749 Male, age 80, left hemisphere 160.3
2527 Male, age 74, both hemispheres 110.2
2045 Male, age 76, both hemispheres 101.1
1873 Female, age 85, both hemispheres 99.7
2082 Female, age 91, right hemisphere 72.7
Hippocampus, CA2
nTPM: 111.8
1963 Male, age 80, left hemisphere 148.9
2249 Male, age 74, both hemispheres 118.9
1892 Male, age 76, both hemispheres 113.9
2437 Female, age 94, left hemisphere 113.2
1940 Female, age 85, left hemisphere 100.4
2113 Female, age 91, right hemisphere 75.8
Hippocampus, CA3
nTPM: 100.0
2436 Male, age 74, both hemispheres 116.6
2620 Female, age 94, left hemisphere 103.0
1867 Male, age 76, both hemispheres 99.7
1891 Female, age 85, both hemispheres 96.8
2861 Female, age 67, both hemispheres 95.4
2137 Male, age 80, left hemisphere 88.5
Parahippocampal cortex
nTPM: 95.9
1933 Female, age 85, both hemispheres 121.0
1990 Female, age 91, right hemisphere 111.5
2532 Female, age 72, left hemisphere 102.4
2245 Female, age 91, both hemispheres 100.8
2018 Male, age 76, both hemispheres 99.8
2692 Male, age 74, both hemispheres 93.5
1850 Male, age 80, both hemispheres 93.4
2622 Female, age 67, right hemisphere 85.3
2250 Female, age 67, right hemisphere 84.9
2693 Female, age 94, both hemispheres 66.5
Perirhinal gyrus
nTPM: 95.7
1794 Male, age 80, right hemisphere 116.7
1847 Female, age 91, left hemisphere 104.9
2521 Female, age 94, right hemisphere 102.8
1841 Female, age 85, right hemisphere 82.0
2848 Male, age 76, right hemisphere 72.4
Subiculum
nTPM: 113.6
1901 Male, age 80, both hemispheres 134.4
1977 Female, age 85, both hemispheres 129.6
2042 Male, age 76, both hemispheres 128.1
2619 Male, age 74, both hemispheres 117.9
2438 Female, age 94, left hemisphere 89.3
2729 Female, age 91, right hemisphere 82.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 112.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 112.3
Samples: 197

Max nTPM: 356.0
Min nTPM: 8.8
Std nTPM: 58.3
Median nTPM: 102.4
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 356.0
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 336.7
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 295.8
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 269.0
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 251.3
GTEX-1C64N-0011-R1b-SM-7P8Q7 50-59 years, male 249.9
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 238.1
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 233.0
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 224.1
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 222.2
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 215.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 45.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 45.2
FF:10169-103B7 60 years, female 55.0
FF:10153-102I9 76 years, female 35.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 30.5
Pig sample Sample description nTPM
Subiculum
nTPM: 28.8
Samples: 4

Max nTPM: 47.0
Min nTPM: 18.6
Sample A Female 47.0
Sample B Female 25.9
Sample C Male 23.5
Sample D Male 18.6
Dorsal hippocampus
nTPM: 29.2
Samples: 4

Max nTPM: 47.2
Min nTPM: 16.5
Sample A Female 47.2
Sample B Female 26.7
Sample C Male 26.2
Sample D Male 16.5
Entorhinal cortex
nTPM: 26.6
Samples: 4

Max nTPM: 37.2
Min nTPM: 17.8
Sample A Female 23.9
Sample B Female 27.6
Sample C Male 37.2
Sample D Male 17.8
Ventral hippocampus
nTPM: 30.5
Samples: 4

Max nTPM: 39.4
Min nTPM: 15.9
Sample A Female 38.9
Sample B Female 27.7
Sample C Male 39.4
Sample D Male 15.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 5.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 5.8
Samples: 4

Max nTPM: 9.6
Min nTPM: 1.6
Sample A Male 9.6
Sample B Male 8.8
Sample C Female 1.6
Sample D Female 3.1
Hippocampal formation
nTPM: 3.3
Samples: 4

Max nTPM: 5.1
Min nTPM: 0.9
Sample A Male 2.6
Sample B Male 5.1
Sample C Female 0.9
Sample D Female 4.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
74581181 Antisense, RP_060215_02_G02, Mouse strain C57BL/6J (56 days, male) 0.5

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