HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Not detected
RNA expressioni
Consensus:728.3 nTPM
HPA Brain:500.3 nTPM
GTEx:728.3 nTPM
FANTOM5:212.8 Scaled Tags Per Million
Pig:64.8 nTPM
Mouse:149.1 nTPM
Allen mouse:18.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043991
Glial cells High
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 500.3
Sample id Sample description nTPM
Hippocampus
nTPM: 331.1
1911 Female, age 85, right hemisphere 427.3
2621 Female, age 67, right hemisphere 371.4
2529 Female, age 94, left hemisphere 336.0
1898 Male, age 80, left hemisphere 330.6
1855 Male, age 76, left hemisphere 274.6
2148 Female, age 91, left hemisphere 246.7
Dentate gyrus
nTPM: 343.6
2530 Female, age 94, left hemisphere 596.4
2010 Male, age 76, both hemispheres 390.4
2528 Male, age 74, both hemispheres 332.8
2246 Female, age 85, both hemispheres 279.4
2531 Female, age 67, both hemispheres 245.5
1927 Female, age 91, both hemispheres 216.9
Entorhinal gyrus
nTPM: 356.3
2117 Female, age 91, right hemisphere 576.3
2764 Male, age 80, right hemisphere 456.1
1938 Female, age 85, left hemisphere 318.3
2613 Female, age 94, left hemisphere 284.4
2686 Male, age 75, right hemisphere 264.7
1787 Male, age 76, left hemisphere 238.1
Hippocampus, CA1
nTPM: 263.9
1873 Female, age 85, both hemispheres 319.7
2527 Male, age 74, both hemispheres 309.9
2082 Female, age 91, right hemisphere 278.8
2749 Male, age 80, left hemisphere 264.6
2045 Male, age 76, both hemispheres 146.4
Hippocampus, CA2
nTPM: 346.9
1963 Male, age 80, left hemisphere 447.5
2249 Male, age 74, both hemispheres 430.9
2437 Female, age 94, left hemisphere 357.6
1940 Female, age 85, left hemisphere 334.1
2113 Female, age 91, right hemisphere 290.8
1892 Male, age 76, both hemispheres 220.4
Hippocampus, CA3
nTPM: 254.2
1891 Female, age 85, both hemispheres 515.3
1867 Male, age 76, both hemispheres 304.1
2436 Male, age 74, both hemispheres 238.6
2137 Male, age 80, left hemisphere 174.6
2620 Female, age 94, left hemisphere 161.3
2861 Female, age 67, both hemispheres 131.1
Parahippocampal cortex
nTPM: 278.5
2532 Female, age 72, left hemisphere 400.6
2692 Male, age 74, both hemispheres 388.1
1990 Female, age 91, right hemisphere 346.3
2018 Male, age 76, both hemispheres 310.5
1850 Male, age 80, both hemispheres 301.1
1933 Female, age 85, both hemispheres 288.9
2245 Female, age 91, both hemispheres 275.2
2693 Female, age 94, both hemispheres 199.4
2250 Female, age 67, right hemisphere 159.9
2622 Female, age 67, right hemisphere 115.3
Perirhinal gyrus
nTPM: 191.9
1794 Male, age 80, right hemisphere 208.5
2848 Male, age 76, right hemisphere 202.2
2521 Female, age 94, right hemisphere 195.6
1847 Female, age 91, left hemisphere 183.7
1841 Female, age 85, right hemisphere 169.7
Subiculum
nTPM: 500.3
2042 Male, age 76, both hemispheres 780.7
1901 Male, age 80, both hemispheres 604.0
1977 Female, age 85, both hemispheres 500.2
2438 Female, age 94, left hemisphere 473.0
2619 Male, age 74, both hemispheres 349.4
2729 Female, age 91, right hemisphere 294.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 728.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 728.3
Samples: 197

Max nTPM: 2812.5
Min nTPM: 82.8
Std nTPM: 432.1
Median nTPM: 636.2
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 2812.5
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 2483.7
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 2122.5
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 1826.7
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 1769.0
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 1678.9
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 1652.5
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 1561.4
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 1544.0
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 1531.0
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 1528.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 212.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 212.8
FF:10153-102I9 76 years, female 277.0
FF:10169-103B7 60 years, female 148.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 64.8
Pig sample Sample description nTPM
Subiculum
nTPM: 34.5
Samples: 4

Max nTPM: 42.4
Min nTPM: 28.1
Sample A Female 42.4
Sample B Female 35.5
Sample C Male 28.1
Sample D Male 32.0
Dorsal hippocampus
nTPM: 64.8
Samples: 4

Max nTPM: 97.8
Min nTPM: 33.3
Sample A Female 97.8
Sample B Female 49.8
Sample C Male 78.1
Sample D Male 33.3
Entorhinal cortex
nTPM: 42.5
Samples: 4

Max nTPM: 48.5
Min nTPM: 36.9
Sample A Female 43.0
Sample B Female 48.5
Sample C Male 36.9
Sample D Male 41.6
Ventral hippocampus
nTPM: 46.6
Samples: 4

Max nTPM: 54.9
Min nTPM: 30.5
Sample A Female 54.9
Sample B Female 30.5
Sample C Male 46.2
Sample D Male 54.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 149.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 104.2
Samples: 4

Max nTPM: 116.0
Min nTPM: 86.1
Sample A Male 116.0
Sample B Male 103.5
Sample C Female 111.3
Sample D Female 86.1
Hippocampal formation
nTPM: 149.1
Samples: 4

Max nTPM: 188.9
Min nTPM: 118.5
Sample A Male 138.0
Sample B Male 118.5
Sample C Female 188.9
Sample D Female 151.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 18.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 18.0
45668 Antisense, RP_040324_01_H05, Mouse strain C57BL/6J (56 days, male) 18.0
67936386 Antisense, RP_040324_01_H05, Mouse strain C57BL/6J (56 days, male) 10.8

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